RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ZNF441Q8N8Z8 693 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 IP6K3Q96PC2 410 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 SAMD10Q9BYL1 202 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 OR1A1Q9P1Q5 309 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 CLN8Q9UBY8 286 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 PLXNA2O75051 1894 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 PIGBOS1A0A0B4J2F0 54 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 MAP1LC3B2A6NCE7 125 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 PPP5D1E7EU14 171 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 ST8SIA5O15466 376 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 EIF2S3P41091 472 aaKnown RBP13.88□□□□□ -0.19
VARS2-212ENST00000542001 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
VARS2-212ENST00000542001 IL13RA2Q14627 380 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 OR10D4PQ8NGN7 298 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 SAT2Q96F10 170 aaPredicted RBP13.88□□□□□ -0.19
VARS2-212ENST00000542001 MAP1LC3BQ9GZQ8 125 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 GTF3C1Q12789 2109 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 PROB1E7EW31 1015 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 E9PLN8 166 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 RHBDL1O75783 438 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 DHODHQ02127 395 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 RNPS1Q15287 305 aaKnown RBP13.88□□□□□ -0.19
VARS2-212ENST00000542001 DHRS11Q6UWP2 260 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 DEPPQ9NTK1 212 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 TMEM30CPA0ZSE6 113 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 K7ESF4 209 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 IGHMP01871 453 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 TMEM41BQ5BJD5 291 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 TMEM68Q96MH6 324 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 HSF4Q9ULV5 492 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 TRIOO75962 3097 aa13.88□□□□□ -0.19
VARS2-212ENST00000542001 TOX4O94842 621 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 SP1P08047 785 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 SULT1A1P50225 295 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 TMEM230Q96A57 120 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 RNF126Q9BV68 326 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 TUBG2Q9NRH3 451 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 SLC2A8Q9NY64 477 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 OR7C2O60412 319 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 FFAR4Q5NUL3 377 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 C1orf87Q8N0U7 546 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 LNP1A1A4G5 178 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 NUDT19A8MXV4 375 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 PHOX2AO14813 284 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 DEDDO75618 318 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 FABP1P07148 127 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 APELAP0DMC3 54 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 DTYMKP23919 212 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 MRPL14Q6P1L8 145 aaKnown RBP13.87□□□□□ -0.19
VARS2-212ENST00000542001 CYB561D1Q8N8Q1 229 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 CPEB3Q8NE35 698 aaKnown RBP13.87□□□□□ -0.19
VARS2-212ENST00000542001 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 IMMP1LQ96LU5 166 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 ZPBPQ9BS86 351 aa13.87□□□□□ -0.19
VARS2-212ENST00000542001 H0YL77 283 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 RPL36A-HNRNPH2H7BZ11 118 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 FABP4P15090 132 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 NCR3LG1Q68D85 454 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 ZNF818PQ6ZRF7 136 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 SSMEM1Q8WWF3 244 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 PRO1933Q9H354 126 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 ATP23Q9Y6H3 246 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 MUC6Q6W4X9 2439 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 PINLYPA6NC86 204 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 CD8AP01732 235 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 LRP11Q86VZ4 500 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 BSCL2Q96G97 398 aaPredicted RBP13.86□□□□□ -0.19
VARS2-212ENST00000542001 S1PR3Q99500 378 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 KLF7O75840 302 aaPredicted RBP13.86□□□□□ -0.19
VARS2-212ENST00000542001 TMEM211Q6ICI0 200 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 MARS2Q96GW9 593 aaKnown RBP13.86□□□□□ -0.19
VARS2-212ENST00000542001 ABHD14AQ9BUJ0 271 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 SEC11CQ9BY50 192 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 ZNF665Q9H7R5 613 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 MTCH1Q9NZJ7 389 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 MED13Q9UHV7 2174 aa13.86□□□□□ -0.19
VARS2-212ENST00000542001 MDFIC2A0A1B0GVS7 189 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 CRYM-AS1A6NIL9 109 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 C17orf112F2Z3M2 114 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 CD200P41217 278 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 MEOX2P50222 304 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 SMIM21Q3B7S5 101 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 C9orf152Q5JTZ5 239 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 FBXW9Q5XUX1 488 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 OR13D1Q8NGV5 346 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 LEAP2Q969E1 77 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 DECR2Q9NUI1 292 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 OR2W1Q9Y3N9 320 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 V9GYS6 101 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 TICRRQ7Z2Z1 1910 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 WNT9BO14905 357 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 ATXN7O15265 892 aaPredicted RBP13.85□□□□□ -0.19
VARS2-212ENST00000542001 YIF1AO95070 293 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 MT-CO2P00403 227 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 POC1AQ8NBT0 407 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 FAM131CQ96AQ9 280 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 ACY3Q96HD9 319 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 MELTFP08582 738 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 GNB1P62873 340 aa13.85□□□□□ -0.19
VARS2-212ENST00000542001 OR5B21A6NL26 309 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms