RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
DDB1-218ENST00000540784 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 MGAT4AQ9UM21 535 aa12.63□□□□□ -0.39
DDB1-218ENST00000540784 A0A087X0M5 115 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 A0A1B0GX30 115 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 SDCBPO00560 298 aaPredicted RBP12.62□□□□□ -0.39
DDB1-218ENST00000540784 HBZP02008 142 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 SAA4P35542 130 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 DEFB112Q30KQ8 113 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 ZNF260Q3ZCT1 412 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 HACD4Q5VWC8 232 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 MOB1BQ7L9L4 216 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 SIGLECL1Q8N7X8 197 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 OR1L1Q8NH94 360 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 DYNC2LI1Q8TCX1 351 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 Q9N2K0 584 aa12.62□□□□□ -0.39
DDB1-218ENST00000540784 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDB1-218ENST00000540784 RSL24D1Q9UHA3 163 aaKnown RBP12.62□□□□□ -0.39
DDB1-218ENST00000540784 SMIM31A0A1B0GVY4 71 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 F2RL2O00254 374 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 XRCC3O43542 346 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 HPGDSO60760 199 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 APOA1P02647 267 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 CD34P28906 385 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 PITPNAQ00169 270 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 PNLIPRP3Q17RR3 467 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 TMEM30BQ3MIR4 351 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 ZNF626Q68DY1 528 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 ZNF596Q8TC21 504 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 GALMQ96C23 342 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 ZNF286AQ9HBT8 521 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 NDUFA13Q9P0J0 144 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 ELF5Q9UKW6 265 aaPredicted RBP12.61□□□□□ -0.39
DDB1-218ENST00000540784 KIAA2026Q5HYC2 2103 aa12.61□□□□□ -0.39
DDB1-218ENST00000540784 SETD2Q9BYW2 2564 aaPredicted RBP12.6□□□□□ -0.39
DDB1-218ENST00000540784 A0A0A6YYJ9 748 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 ZNF701M0R085 212 aaPredicted RBP12.6□□□□□ -0.39
DDB1-218ENST00000540784 TCF21O43680 179 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 MNDAP41218 407 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 RIPPLY3P57055 190 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 LOXL3P58215 753 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 GNG2P59768 71 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 HMGN3Q15651 99 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 TUSC1Q2TAM9 212 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 IZUMO1Q8IYV9 350 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 DTX3Q8N9I9 347 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 LEAP2Q969E1 77 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 ZNF48Q96MX3 618 aaPredicted RBP12.6□□□□□ -0.39
DDB1-218ENST00000540784 JMJD8Q96S16 334 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 RBM38Q9H0Z9 239 aaKnown RBP12.6□□□□□ -0.39
DDB1-218ENST00000540784 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 CCDC59Q9P031 241 aaKnown RBP12.6□□□□□ -0.39
DDB1-218ENST00000540784 GNG12Q9UBI6 72 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 PSG11Q9UQ72 335 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 TBL2Q9Y4P3 447 aaKnown RBP12.6□□□□□ -0.39
DDB1-218ENST00000540784 NAV3Q8IVL0 2385 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 DSCAML1Q8TD84 2053 aa12.6□□□□□ -0.39
DDB1-218ENST00000540784 MXRA5Q9NR99 2828 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 IGHV3-43A0A0B4J1X8 118 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 MDFIC2A0A1B0GVS7 189 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 TMEM235A6NFC5 223 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 ODF3BA8MYP8 253 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 FAM25AB3EWG3 89 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 FAM25CB3EWG5 89 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 FAM25GB3EWG6 89 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 TRDCB7Z8K6 153 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 J3QR06 171 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 EIF4EP06730 217 aaKnown RBP12.59□□□□□ -0.39
DDB1-218ENST00000540784 MELTFP08582 738 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 FCGR3AP08637 254 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 FBP1P09467 338 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 IGHV3-43DP0DP04 118 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 ELK1P19419 428 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 HTR1DP28221 377 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 HTD2P86397 168 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 BAMBIQ13145 260 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 UTF1Q5T230 341 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 Q6YL49 198 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 Q6ZPA2 131 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 BEND2Q8NDZ0 799 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 CREB3L1Q96BA8 519 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 DGCR14Q96DF8 476 aaKnown RBP12.59□□□□□ -0.39
DDB1-218ENST00000540784 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 AUNIPQ9H7T9 357 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
DDB1-218ENST00000540784 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
DDB1-218ENST00000540784 DPPA5A6NC42 116 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms