RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SLC35D1Q9NTN3 355 aa8.18□□□□□ -1.1
CTNNA1-243ENST00000540387 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-243ENST00000540387 PLA2G3Q9NZ20 509 aa8.18□□□□□ -1.1
CTNNA1-243ENST00000540387 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
CTNNA1-243ENST00000540387 PCDH15Q96QU1 1955 aa8.18□□□□□ -1.1
CTNNA1-243ENST00000540387 DIRC3C9JPN6 131 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 CORTO00230 105 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 CDX4O14627 284 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 TIAF1O95411 115 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 MPIG6BO95866 241 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 ALG10Q5BKT4 473 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 CDCP2Q5VXM1 449 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 WDR73Q6P4I2 378 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 VN1R4Q7Z5H5 301 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 OR4N5Q8IXE1 308 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 SLC22A24Q8N4F4 322 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 LRRC75AQ8NAA5 344 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 OR52R1Q8NGF1 315 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 OR5C1Q8NGR4 320 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 ZNF519Q8TB69 540 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 WDYHV1Q96HA8 205 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 ARHGAP5-AS1Q96IT6 56 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 OR2A5Q96R48 311 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 PILRAQ9UKJ1 303 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 MRPS16Q9Y3D3 137 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 RIF1Q5UIP0 2472 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 IGHV5-51A0A0C4DH38 117 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 IGHV1-69-2A0A0G2JMI3 117 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 MSTNO14793 375 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 SERF1AO75920 110 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 SERPINA7P05543 415 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 ADMP35318 185 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 LCN2P80188 198 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 TMEM187Q14656 261 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 MSMO1Q15800 293 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 SLC18B1Q6NT16 456 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 LCN15Q6UWW0 184 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 CPEB2Q7Z5Q1 589 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 NIT1Q86X76 327 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 NUDT22Q9BRQ3 303 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 CLEC5AQ9NY25 188 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 MRPL27Q9P0M9 148 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 FBLN5Q9UBX5 448 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 EMC9Q9Y3B6 208 aa8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 ZFHX2Q9C0A1 2572 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-243ENST00000540387 A0A0U1RQK1 487 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 A0A1W2PQM1 296 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 OR6C6A6NF89 314 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 SAP30O75446 220 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 KBTBD11O94819 623 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 RENP00797 406 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 AADACP22760 399 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 DUSP3P51452 185 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 DYNLT3P51808 116 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 TAS2R30P59541 319 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 KRTDAPP60985 99 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 RPS15AP62244 130 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ROM1Q03395 351 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 DEFB110Q30KQ9 67 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 FFAR4Q5NUL3 377 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 OR4A47Q6IF82 309 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 KCNIP4Q6PIL6 250 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 RNF144BQ7Z419 303 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 PSMF1Q92530 271 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 FAM71F1Q96KD3 344 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 TSPAN32Q96QS1 320 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ZFYVE21Q9BQ24 234 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 CCDC3Q9BQI4 270 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 BANF2Q9H503 90 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ELOVL5Q9NYP7 299 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ASCC3Q8N3C0 2202 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 IGLC7A0M8Q6 106 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 H0YGG7 62 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 DUX1O43812 170 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ONECUT2O95948 504 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 BGLAPP02818 100 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 GLI4P10075 376 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ESDP10768 282 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 GABRA3P34903 492 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 GRK6P43250 576 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 PIGPP57054 158 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ARF3P61204 181 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 CCL7P80098 99 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 C17orf67Q0P5P2 114 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 TMEM252Q8N6L7 170 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 C18orf12Q96KH6 178 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 PARLQ9H300 379 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 PLEKHF2Q9H8W4 249 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 LOC101059948A0A1B0GTJ6 334 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ODAMA1E959 279 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 ZNF891A8MT65 544 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 VSTM5A8MXK1 200 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 PROB1E7EW31 1015 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 J3KRW8 73 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 P2RY10O00398 339 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 SH2D1BO14796 132 aa8.16□□□□□ -1.1
CTNNA1-243ENST00000540387 CST7O76096 145 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms