RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 LYPD6Q86Y78 171 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 C8orf31Q8N9H6 132 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 CNIH3Q8TBE1 160 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 TMEM163Q8TC26 289 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 ZNF107Q9UII5 783 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 WSB1Q9Y6I7 421 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 TRAV39A0A0B4J263 110 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 LINC01619G3V211 115 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 G3V318 75 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 APOL3O95236 402 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 IFNA6P05013 189 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 ISG15P05161 165 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 OR8U9P0C7N5 309 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 IL3RAP26951 378 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 KCNJ3P48549 501 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 SLURP1P55000 103 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 ZNF691Q5VV52 312 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 ELP2Q6IA86 826 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 GID4Q8IVV7 300 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 SGPP2Q8IWX5 399 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 C8orf59Q8N0T1 100 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 SETD9Q8NE22 299 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 OR52M1Q8NGK5 317 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 PLPPR1Q8TBJ4 325 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 RNF166Q96A37 237 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 OR4C12Q96R67 309 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 NR1H4Q96RI1 486 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 ZCCHC4Q9H5U6 513 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 WARS2Q9UGM6 360 aaKnown RBP8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 MYRFQ9Y2G1 1151 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 GMPPBQ9Y5P6 360 aa8.97□□□□□ -0.97
CLSTN3-209ENST00000539982 ZAR1LA6NP61 321 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 M0R129 80 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 EPHA2P29317 976 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 OR10H4Q8NGA5 316 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 OR13C9Q8NGT0 318 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 OR2G2Q8NGZ5 317 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 ARPC1AQ92747 370 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 IL4I1Q96RQ9 567 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 TOLLIPQ9H0E2 274 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 ALX4Q9H161 411 aaPredicted RBP8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 TPSG1Q9NRR2 321 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 FRRS1LQ9P0K9 344 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 GNG8Q9UK08 70 aa8.96□□□□□ -0.98
CLSTN3-209ENST00000539982 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 SDCBPO00560 298 aaPredicted RBP8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 ATP6V0E1O15342 81 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 HSPA12AO43301 675 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 TXNL1O43396 289 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 RPSAP08865 295 aaKnown RBP8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 SLC2A2P11168 524 aaPredicted RBP8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 PITPNAQ00169 270 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 KISS1Q15726 138 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 HAGHQ16775 308 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 TP53I3Q53FA7 332 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 FAM220AQ7Z4H9 259 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 MINDY2Q8NBR6 621 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 ARL11Q969Q4 196 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 RBMXL1Q96E39 390 aaKnown RBP8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 GFOD1Q9NXC2 390 aa8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 MRPS28Q9Y2Q9 187 aaKnown RBP8.95□□□□□ -0.98
CLSTN3-209ENST00000539982 IGHV4OR15-8A0A075B7B6 117 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 A0A087WW49 117 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 C15orf65H3BRN8 121 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 LGALS1P09382 135 aaKnown RBP8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 ATP6V1E1P36543 226 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 ZNF137PP52743 207 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 ZNF85Q03923 595 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 IL13RA2Q14627 380 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 PLECQ15149 4684 aaKnown RBP8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 Q3ZCU0 254 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 C12orf73Q69YU5 71 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 FDX2Q6P4F2 183 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 PXT1Q8NFP0 134 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 OR51A4Q8NGJ6 313 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 OR13C3Q8NGS6 347 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 FBLIM1Q8WUP2 373 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 DPCDQ9BVM2 203 aaPredicted RBP8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 ELOVL1Q9BW60 279 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 IMPAD1Q9NX62 359 aa8.94□□□□□ -0.98
CLSTN3-209ENST00000539982 IGHV7-81A0A0B4J1V7 117 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 ORC5O43913 435 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 TNFAIP8O95379 198 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 IGLV1-51P01701 117 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 HLA-DRB1P01911 266 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 HSPB1P04792 205 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 ARSBP15848 533 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 CCR9P51686 369 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 NANOS3P60323 173 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 MMDQ15546 238 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 KCTD20Q7Z5Y7 419 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 SUMF2Q8NBJ7 301 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 OR5D14Q8NGL3 314 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 OR10AC1Q8NH08 325 aa8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 TRUB1Q8WWH5 349 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 YTHDF1Q9BYJ9 559 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-209ENST00000539982 PARP11Q9NR21 331 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms