RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HS3ST1O14792 307 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 SPRY3O43610 288 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 HAND1O96004 215 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 LMO1P25800 156 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 SURF2Q15527 256 aaPredicted RBP14.23□□□□□ -0.13
COPS3-212ENST00000539941 FAHD2BQ6P2I3 314 aaPredicted RBP14.23□□□□□ -0.13
COPS3-212ENST00000539941 LRRC29Q8WV35 223 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 RDH5Q92781 318 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 FAHD2AQ96GK7 314 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 Q9N2K0 584 aa14.23□□□□□ -0.13
COPS3-212ENST00000539941 FXYD6-FXYD2A0A087WZ82 144 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 KIR2DS1A0A191URI9 304 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.22□□□□□ -0.13
COPS3-212ENST00000539941 FAM221AA4D161 298 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 SLC33A1O00400 549 aaPredicted RBP14.22□□□□□ -0.13
COPS3-212ENST00000539941 SIX6O95475 246 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 IGHV1-46P01743 117 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 CD55P08174 381 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 FPR2P25090 351 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 KIR2DS4P43632 304 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 TNFAIP6P98066 277 aaPredicted RBP14.22□□□□□ -0.13
COPS3-212ENST00000539941 TFF3Q07654 80 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 ZNF345Q14585 488 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 KIR2DS1Q14954 304 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 LDLRAD3Q86YD5 345 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 DMRTC2Q8IXT2 367 aaPredicted RBP14.22□□□□□ -0.13
COPS3-212ENST00000539941 LINC01560Q8TB33 94 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 MFFQ9GZY8 342 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 FXYD6Q9H0Q3 95 aa14.22□□□□□ -0.13
COPS3-212ENST00000539941 SDCBPO00560 298 aaPredicted RBP14.21□□□□□ -0.13
COPS3-212ENST00000539941 OR5H8P0DN80 308 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 SPP1P10451 314 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 GRNP28799 593 aaKnown RBP14.21□□□□□ -0.13
COPS3-212ENST00000539941 SERPINF1P36955 418 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 KCNJ3P48549 501 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 ARHGDIBP52566 201 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 TAS2R31P59538 309 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 UBE2MP61081 183 aaKnown RBP14.21□□□□□ -0.13
COPS3-212ENST00000539941 SRSF1Q07955 248 aaKnown RBP eCLIP14.21□□□□□ -0.13
COPS3-212ENST00000539941 CDSNQ15517 529 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 ZNF880Q6PDB4 577 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 DHRS11Q6UWP2 260 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 MOB1BQ7L9L4 216 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 PEG10Q86TG7 708 aaKnown RBP14.21□□□□□ -0.13
COPS3-212ENST00000539941 SLC25A42Q86VD7 318 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 PUSL1Q8N0Z8 303 aaKnown RBP14.21□□□□□ -0.13
COPS3-212ENST00000539941 GAPTQ8N292 157 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 THAP6Q8TBB0 222 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 ITLN1Q8WWA0 313 aa14.21□□□□□ -0.13
COPS3-212ENST00000539941 CLEC18AA5D8T8 446 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 RFPL4AA6NLU0 287 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 ZNF729A6NN14 1252 aaPredicted RBP14.2□□□□□ -0.14
COPS3-212ENST00000539941 RFPL4AL1F8VTS6 287 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 SIRPB1O00241 398 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 HSPB6O14558 160 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 WNT9BO14905 357 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 OR2F2O95006 317 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 IGHV2-70P01814 119 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 OR4E1P0C645 316 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 OR2F1Q13607 317 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 SMCO1Q147U7 214 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 C4orf46Q504U0 113 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 AADACL3Q5VUY0 350 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 CLEC18BQ6UXF7 455 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 Q6ZPA2 131 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 TMED4Q7Z7H5 227 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 MOGAT3Q86VF5 341 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 CLEC18CQ8NCF0 446 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 MRPL30Q8TCC3 161 aaKnown RBP14.2□□□□□ -0.14
COPS3-212ENST00000539941 Q8TCH9 128 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 WDR13Q9H1Z4 485 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 NIT2Q9NQR4 276 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 DECR2Q9NUI1 292 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 PPP1R14DQ9NXH3 145 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 GPR132Q9UNW8 380 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 RNF115Q9Y4L5 304 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 HECTD1Q9ULT8 2610 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 KANTRA0A1W2PQU2 76 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 C17orf100A8MU93 164 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 C1orf196B1AJZ1 125 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 E7EQL1 145 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 LHBP01229 141 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 CTXN2P0C2S0 81 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 GNLYP22749 145 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 APOBEC3AP31941 199 aaPredicted RBP14.2□□□□□ -0.14
COPS3-212ENST00000539941 TESK1Q15569 626 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 EFNB3Q15768 340 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 TMEM185AQ8NFB2 350 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 MARCH1Q8TCQ1 289 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 OR14J1Q9UGF5 321 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 DMRT1Q9Y5R6 373 aa14.2□□□□□ -0.14
COPS3-212ENST00000539941 CHD3Q12873 2000 aaKnown RBP14.2□□□□□ -0.14
COPS3-212ENST00000539941 DIDO1Q9BTC0 2240 aaKnown RBP14.19□□□□□ -0.14
COPS3-212ENST00000539941 TRDCB7Z8K6 153 aa14.19□□□□□ -0.14
COPS3-212ENST00000539941 C3orf80F5H4A9 247 aa14.19□□□□□ -0.14
COPS3-212ENST00000539941 CLDN14O95500 239 aa14.19□□□□□ -0.14
COPS3-212ENST00000539941 TNFRSF1AP19438 455 aa14.19□□□□□ -0.14
COPS3-212ENST00000539941 GLP1RP43220 463 aa14.19□□□□□ -0.14
COPS3-212ENST00000539941 NPY4RP50391 375 aa14.19□□□□□ -0.14
COPS3-212ENST00000539941 ZNF497Q6ZNH5 498 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms