RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 IGHV3-43DP0DP04 118 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 RCC1P18754 421 aaPredicted RBP13.3□□□□□ -0.28
DDB1-215ENST00000539712 ZNF134P52741 427 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 SLC35A2P78381 396 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 ZNF816Q0VGE8 651 aaPredicted RBP13.3□□□□□ -0.28
DDB1-215ENST00000539712 SYT6Q5T7P8 510 aaPredicted RBP13.3□□□□□ -0.28
DDB1-215ENST00000539712 C5orf24Q7Z6I8 188 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 CENPVQ7Z7K6 275 aaPredicted RBP13.3□□□□□ -0.28
DDB1-215ENST00000539712 NKAIN3Q8N8D7 197 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 NEK7Q8TDX7 302 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 MND1Q9BWT6 205 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 VCXQ9H320 206 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 PEX16Q9Y5Y5 336 aa13.3□□□□□ -0.28
DDB1-215ENST00000539712 IGHV1-3A0A0C4DH29 117 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 H0YHG0 523 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 HSD17B6O14756 317 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 CRTAPO75718 401 aaPredicted RBP13.29□□□□□ -0.28
DDB1-215ENST00000539712 FUT3P21217 361 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 REG1BP48304 166 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 HNF4GQ14541 408 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 SPHARQ15513 63 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 OXLD1Q5BKU9 147 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 C1orf100Q5SVJ3 147 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 MS4A15Q8N5U1 240 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 Q8N6K4 173 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 WFDC9Q8NEX5 89 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 OR4F17Q8NGA8 305 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 OR4K15Q8NH41 348 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 OR1L1Q8NH94 360 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 MYDGFQ969H8 173 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 RBMXL1Q96E39 390 aaKnown RBP13.29□□□□□ -0.28
DDB1-215ENST00000539712 OR4F4Q96R69 305 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 DUSP21Q9H596 190 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 ETAA1Q9NY74 926 aa13.29□□□□□ -0.28
DDB1-215ENST00000539712 A0A1W2PRX2 142 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 CCRL2O00421 344 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 IGKV1D-33P01593 117 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 IGKV1-33P01594 117 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 GAPDHP04406 335 aaKnown RBP13.28□□□□□ -0.28
DDB1-215ENST00000539712 GLAP06280 429 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 MAPK3P27361 379 aaPredicted RBP13.28□□□□□ -0.28
DDB1-215ENST00000539712 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
DDB1-215ENST00000539712 CT45A1Q5HYN5 189 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 OR10K2Q6IF99 312 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 CT45A3Q8NHU0 189 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 PHYHIPQ92561 330 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 THRSPQ92748 146 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 FAM46BQ96A09 425 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 TMED9Q9BVK6 235 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 MBNL3Q9NUK0 354 aaKnown RBP13.28□□□□□ -0.28
DDB1-215ENST00000539712 TRAPPC2LQ9UL33 140 aa13.28□□□□□ -0.28
DDB1-215ENST00000539712 IGHV3-72A0A0B4J1Y9 119 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 TCRBV4S1A1TA0A5B7 111 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 LINC01548A6NM66 108 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 ZNF736B4DX44 427 aaPredicted RBP13.27□□□□□ -0.29
DDB1-215ENST00000539712 FGF16O43320 207 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 CA11O75493 328 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 HBZP02008 142 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 PRB2P02812 416 aaPredicted RBP13.27□□□□□ -0.29
DDB1-215ENST00000539712 VSIG8P0DPA2 414 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 TMEM11P17152 192 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 MYF6P23409 242 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 ZNF137PP52743 207 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 QRFPP83859 136 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 GPR50Q13585 617 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 Q3ZCU0 254 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 SLC25A48Q6ZT89 311 aaKnown RBP13.27□□□□□ -0.29
DDB1-215ENST00000539712 IZUMO1Q8IYV9 350 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 RTN4IP1Q8WWV3 396 aaPredicted RBP13.27□□□□□ -0.29
DDB1-215ENST00000539712 EAF1Q96JC9 268 aaPredicted RBP13.27□□□□□ -0.29
DDB1-215ENST00000539712 PLSCR3Q9NRY6 295 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 GHRLQ9UBU3 117 aa13.27□□□□□ -0.29
DDB1-215ENST00000539712 UBE2QL1A1L167 161 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 PDCD6O75340 191 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 UCHL1P09936 223 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 SRMP19623 302 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 UNC119Q13432 240 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 HES1Q14469 280 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 TMEM91Q6ZNR0 172 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 Q6ZPA2 131 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 CEACAM19Q7Z692 300 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 MOB3BQ86TA1 216 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 MRPL30Q8TCC3 161 aaKnown RBP13.26□□□□□ -0.29
DDB1-215ENST00000539712 NOL4LQ96MY1 436 aaPredicted RBP13.26□□□□□ -0.29
DDB1-215ENST00000539712 GFI1Q99684 422 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 KCNK15Q9H427 330 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 TAF9BQ9HBM6 251 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 SCN3BQ9NY72 215 aa13.26□□□□□ -0.29
DDB1-215ENST00000539712 TSSC4Q9Y5U2 329 aaPredicted RBP13.26□□□□□ -0.29
DDB1-215ENST00000539712 SLC22A1O15245 554 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 SPINT2O43291 252 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 MPIG6BO95866 241 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 IGHG2P01859 326 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 CHATP28329 748 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 HTR2CP28335 458 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 RPS27AP62979 156 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms