RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 FAM27D1Q5T7N8 215 aa15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 PRR18Q8N4B5 295 aa15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 NKAIN3Q8N8D7 197 aa15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 C5orf56Q8N8D9 126 aa15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 OR52M1Q8NGK5 317 aa15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 FAM46BQ96A09 425 aa15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 TSSC4Q9Y5U2 329 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-212ENST00000539372 IGHV1-3A0A0C4DH29 117 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 UBE2QL1A1L167 161 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 C12orf77C9JDV5 145 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 SLC31A2O15432 143 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 GAPDHP04406 335 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 GABPB1Q06547 395 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 ZNF816Q0VGE8 651 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 ACSM3Q53FZ2 586 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 OR10V1Q8NGI7 309 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 OR1L1Q8NH94 360 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 SGCDQ92629 289 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 TMED9Q9BVK6 235 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 MND1Q9BWT6 205 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 DCLRE1BQ9H816 532 aa15.12■□□□□ 0.01
TNFRSF1A-212ENST00000539372 PSMB11A5LHX3 300 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 SPINT2O43291 252 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 CD33P20138 364 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 GP2P55259 537 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 GPR50Q13585 617 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 C6orf141Q5SZD1 244 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 C6orf183Q5T699 404 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 SIGIRRQ6IA17 410 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 ZNF329Q86UD4 541 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 LINC00311Q8N616 119 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 THRSPQ92748 146 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 Q96M66 194 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 NOL4LQ96MY1 436 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 UQCC2Q9BRT2 126 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 GNG12Q9UBI6 72 aa15.11■□□□□ 0.01
TNFRSF1A-212ENST00000539372 NOTCH3Q9UM47 2321 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 FAM90A10PA6NDY2 464 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 FAM90A7PA6NKC0 464 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 FAM90A23PA8MXZ1 464 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 HBZP02008 142 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 PF4P02776 101 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 RCC1P18754 421 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 FUT3P21217 361 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 AQP4P55087 323 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 C8orf31Q8N9H6 132 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 NRG4Q8WWG1 115 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 PHF21AQ96BD5 680 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 RBMXL1Q96E39 390 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 EAF1Q96JC9 268 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 LINC00527Q9UJ94 153 aa15.1■□□□□ 0.01
TNFRSF1A-212ENST00000539372 NCBP2LA6PVI3 153 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 SERPINE3A8MV23 424 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 FGF16O43320 207 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 MPIG6BO95866 241 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 IGLL1P15814 213 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 IL3RAP26951 378 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 ZNF134P52741 427 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 MED22Q15528 200 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 NKAPLQ5M9Q1 402 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 RBM48Q5RL73 367 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 RNLSQ5VYX0 342 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 OR10K2Q6IF99 312 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 UNQ9370/PRO34162Q6UXP9 181 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 C5orf24Q7Z6I8 188 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 LRRTM1Q86UE6 522 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 GAPTQ8N292 157 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 MS4A15Q8N5U1 240 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 ZNF439Q8NDP4 499 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 RTN4IP1Q8WWV3 396 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 SCN3BQ9NY72 215 aa15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 LSM2Q9Y333 95 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-212ENST00000539372 ZNF736B4DX44 427 aaPredicted RBP15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 H0YHG0 523 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 PDCD6O75340 191 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 SC5DO75845 299 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 EBI3Q14213 229 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 SPHARQ15513 63 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 CT45A1Q5HYN5 189 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 SLC25A48Q6ZT89 311 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 CEACAM19Q7Z692 300 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 IZUMO1Q8IYV9 350 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 CT45A3Q8NHU0 189 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 ST6GALNAC6Q969X2 333 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 CST11Q9H112 138 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 KCNK15Q9H427 330 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 TAF9BQ9HBM6 251 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 RAB9BQ9NP90 201 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 GHRLQ9UBU3 117 aa15.08■□□□□ 0
TNFRSF1A-212ENST00000539372 LINC01548A6NM66 108 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 CA11O75493 328 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 Q3ZCU0 254 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 GLT8D1Q68CQ7 371 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 TRAT1Q6PIZ9 186 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 SLC35E3Q7Z769 313 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 Q8N6K4 173 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 WFDC9Q8NEX5 89 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 OR2T10Q8NGZ9 312 aa15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 MRPL30Q8TCC3 161 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-212ENST00000539372 CHPT1Q8WUD6 406 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms