RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TIMM23BQ5SRD1 257 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 CLEC9AQ6UXN8 241 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 OR51H1Q8NH63 302 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 C17orf50Q8WW18 174 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 MS4A7Q9GZW8 240 aaPredicted RBP13.21□□□□□ -0.29
MKS1-204ENST00000537529 MSL2Q9HCI7 577 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 SPEF1Q9Y4P9 236 aa13.21□□□□□ -0.29
MKS1-204ENST00000537529 CACNA1GO43497 2377 aa13.21□□□□□ -0.3
MKS1-204ENST00000537529 A0A1B0GWJ7 208 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 C1QTNF9BB2RNN3 333 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 SSSCA1O60232 199 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 MMP9P14780 707 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 LPAR6P43657 344 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 ZNF83P51522 516 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 POLR2GP62487 172 aaKnown RBP eCLIP13.2□□□□□ -0.3
MKS1-204ENST00000537529 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
MKS1-204ENST00000537529 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 GINS3Q9BRX5 216 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 HRH4Q9H3N8 390 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 WFDC1Q9HC57 220 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
MKS1-204ENST00000537529 WASF3Q9UPY6 502 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 TMEM218A2RU14 115 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 PSPNO60542 156 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 SLC25A6P12236 298 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 TIMP3P35625 211 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 CAV2P51636 162 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 BTN1A1Q13410 526 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 ESPL1Q14674 2120 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 KRTCAP3Q53RY4 240 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 ZNF474Q6S9Z5 364 aaPredicted RBP13.2□□□□□ -0.3
MKS1-204ENST00000537529 SFXN3Q9BWM7 321 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 LIN7CQ9NUP9 197 aaKnown RBP13.2□□□□□ -0.3
MKS1-204ENST00000537529 UFSP2Q9NUQ7 469 aa13.2□□□□□ -0.3
MKS1-204ENST00000537529 HEXAP06865 529 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 PSG2P11465 335 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 CEACAM6P40199 344 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 DEFA5Q01523 94 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
MKS1-204ENST00000537529 S100PBPQ96BU1 408 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 LRRC46Q96FV0 321 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 PLEKHF2Q9H8W4 249 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 LYRM2Q9NU23 88 aaPredicted RBP13.19□□□□□ -0.3
MKS1-204ENST00000537529 A0A1B0GU03 582 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 MKRN2OSH3BPM6 223 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 K7EM74 188 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 IFNL4K9M1U5 179 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 M0R1B8 84 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 WRBO00258 174 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 PITX3O75364 302 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 ID3Q02535 119 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 NHLH2Q02577 135 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 FAM180AQ6UWF9 173 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 RNASE11Q8TAA1 199 aaKnown RBP13.19□□□□□ -0.3
MKS1-204ENST00000537529 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 FAM57AQ8TBR7 257 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 LUZP4Q9P127 313 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
MKS1-204ENST00000537529 IGSF23A1L1A6 192 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 OOEPA6NGQ2 149 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 RNF212BA8MTL3 300 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 ABCD4O14678 606 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 F2RL1P55085 397 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 Q6ZRG5 221 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 RPRMLQ8N4K4 120 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 GALMQ96C23 342 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 MUCL1Q96DR8 90 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 MAGT1Q9H0U3 335 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 TREM1Q9NP99 234 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
MKS1-204ENST00000537529 PTBP3O95758 552 aaKnown RBP13.17□□□□□ -0.3
MKS1-204ENST00000537529 OR8U9P0C7N5 309 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 SPP1P10451 314 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 IL2RGP31785 369 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 CD200P41217 278 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 OR3A1P47881 315 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 OR2Z1Q8NG97 314 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 OR8U1Q8NH10 309 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 OR1L1Q8NH94 360 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 LRRC29Q8WV35 223 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 LSM10Q969L4 123 aaKnown RBP13.17□□□□□ -0.3
MKS1-204ENST00000537529 LRFN3Q9BTN0 628 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 C12orf77C9JDV5 145 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 ATG12O94817 140 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 CRYAAP02489 173 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 EPHA1P21709 976 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 AKR1C2P52895 323 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 ZNF266Q14584 549 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms