RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CD33P20138 364 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 ACP1P24666 158 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 CDKN1AP38936 164 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 FASLGP48023 281 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 PIGPP57054 158 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 TAS2R30P59541 319 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 ABHD17CQ6PCB6 329 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 OR5D14Q8NGL3 314 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 PPP1R14AQ96A00 147 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 ANAPC10Q9UM13 185 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 MRPS28Q9Y2Q9 187 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 MSRB2Q9Y3D2 182 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 B3GALT1Q9Y5Z6 326 aa9.44□□□□□ -0.9
CLSTN3-207ENST00000537408 YPEL1O60688 119 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 TSPOP30536 169 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 ARF1P84077 181 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 Q6ZVH6 145 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 YPEL2Q96QA6 119 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 NUDT22Q9BRQ3 303 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 LRRC3CA6NJW4 275 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF728P0DKX0 622 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF93P35789 620 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 RHOGP84095 191 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 GLIPR1L1Q6UWM5 242 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 CPEB2Q7Z5Q1 589 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF547Q8IVP9 402 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM217Q8N7C4 229 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 CCDC71LQ8N9Z2 235 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 PSMF1Q92530 271 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 ATP5SQ99766 215 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 R4GMQ9 66 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 UNC13CQ8NB66 2214 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 TIAF1O95411 115 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 SCGB1A1P11684 91 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 DYNLT3P51808 116 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 PLA2G2CQ5R387 149 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 SHISA6Q6ZSJ9 500 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 SLC25A45Q8N413 288 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM186Q96B77 213 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 DEFB126Q9BYW3 111 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF703Q9H7S9 590 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 CES1P1Q9UKY3 287 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 PLXNB3Q9ULL4 1909 aa9.43□□□□□ -0.9
CLSTN3-207ENST00000537408 CHD3Q12873 2000 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 WIPF3A6NGB9 483 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 C11orf98E9PRG8 122 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 NPIPB7O75200 414 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 OR1D4P47884 311 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 SRPXP78539 464 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 PLGLB1Q02325 96 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 PAX2Q02962 417 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 DEFB109BQ30KR1 87 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 NICN1Q9BSH3 213 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 GYPAP02724 150 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 RUNX1Q01196 453 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 RAET1LQ5VY80 246 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ZADH2Q8N4Q0 377 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 OR51T1Q8NGJ9 327 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 OR4S2Q8NH73 311 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 AP1S3Q96PC3 154 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 RASL10BQ96S79 203 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 KLRF1Q9NZS2 232 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 B9D1Q9UPM9 204 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF737O75373 536 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 NRASP01111 189 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 KRASP01116 189 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 FAHP16930 419 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 AADACP22760 399 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 IL3RAP26951 378 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 HIST3H3Q16695 136 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ASPHD2Q6ICH7 369 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 MEX3BQ6ZN04 569 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 LIAT1Q6ZQX7 453 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 RTN4IP1Q8WWV3 396 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 BORCS7Q96B45 105 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 COX14Q96I36 57 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 LRP12Q9Y561 859 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 OTOGLQ3ZCN5 2332 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 C9orf172C9J069 976 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 TLX3O43711 291 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF253O75346 499 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 CCL11P51671 97 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ARG2P78540 354 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 SP6Q3SY56 376 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 OR2A1Q8NGT9 310 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF681Q96N22 645 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 AMELYQ99218 206 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 RALGAPA1Q6GYQ0 2036 aa9.42□□□□□ -0.9
CLSTN3-207ENST00000537408 ARID1BQ8NFD5 2236 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 GAGE12BA1L429 117 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 GRIFINA4D1Z8 144 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 P2RY10O00398 339 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 SSSCA1O60232 199 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms