RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 LOC400499M0QZD8 3231 aa7.85□□□□□ -1.15
UBE3B-207ENST00000537063 FRYQ5TBA9 3013 aa7.85□□□□□ -1.15
UBE3B-207ENST00000537063 MED6O75586 246 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 DANCRP0C864 163 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 SLC35E4Q6ICL7 350 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 FIP1L1Q6UN15 594 aaKnown RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 ACP7Q6ZNF0 438 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 OR2C3Q8N628 320 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 LRRC46Q96FV0 321 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 GPHA2Q96T91 129 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 SEBOXQ9HB31 216 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 ERRFI1Q9UJM3 462 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 WASF3Q9UPY6 502 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 SPEF1Q9Y4P9 236 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 BORCS7-ASMTA0A0B4J1R7 106 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 IGSF23A1L1A6 192 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 FAM157AC9JC47 383 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 PSPNO60542 156 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 APOC3P02656 99 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 S100GP29377 79 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 EIF4EBP1Q13541 118 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 MSMO1Q15800 293 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 SPAG16Q8N0X2 631 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 LSM10Q969L4 123 aaKnown RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 TSNAXQ99598 290 aaKnown RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 SMIM3Q9BZL3 60 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 A0A1B0GU03 582 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 IFNL4K9M1U5 179 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 DNASE2O00115 360 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 CD5P06127 495 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 F2RL1P55085 397 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 NHLH2Q02577 135 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 ZNF718Q3SXZ3 478 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 RBMXL3Q8N7X1 1067 aaKnown RBP7.84□□□□□ -1.15
UBE3B-207ENST00000537063 TRAPPC2LQ9UL33 140 aa7.84□□□□□ -1.15
UBE3B-207ENST00000537063 A0A0G2JRQ6 117 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 TMEM30CPA0ZSE6 113 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 IGKV1-39P01597 117 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 IGKV1D-39P04432 117 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 GRPP07492 148 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 CXorf66Q5JRM2 361 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 CLEC9AQ6UXN8 241 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 ZNF295-AS1Q8N0V1 137 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 BOLLQ8N9W6 283 aaKnown RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 PLEKHF2Q9H8W4 249 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 FAM212BQ9NTI7 297 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 COQ3Q9NZJ6 369 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 SSUH2Q9Y2M2 353 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 TIMM8AO60220 97 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 TMEM50AO95807 157 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 PVALBP20472 110 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 TIMP3P35625 211 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 CD200P41217 278 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 RAB5CP51148 216 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 POLR2GP62487 172 aaKnown RBP eCLIP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 BAXQ07812 192 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 C1orf185Q5T7R7 199 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 COQ2Q96H96 371 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 SEC11CQ9BY50 192 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 INTS1Q8N201 2190 aaKnown RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 PROB1E7EW31 1015 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 SIGLEC5O15389 551 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 TNFSF12O43508 249 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 FBXO24O75426 580 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 PSG2P11465 335 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 MUC1P15941 1255 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 OR3A1P47881 315 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 PAX9P55771 341 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 TIMM23BQ5SRD1 257 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 ZNF474Q6S9Z5 364 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 ZNF826PQ6ZT77 177 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 SCRT1Q9BWW7 348 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 NKX6-2Q9C056 277 aaPredicted RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 PARP12Q9H0J9 701 aaKnown RBP7.83□□□□□ -1.16
UBE3B-207ENST00000537063 UQCC1Q9NVA1 299 aa7.83□□□□□ -1.16
UBE3B-207ENST00000537063 FAM186AA6NE01 2351 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 TRAV39A0A0B4J263 110 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 WNT9BO14905 357 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 CFHR2P36980 270 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 CEBPDP49716 269 aaPredicted RBP7.82□□□□□ -1.16
UBE3B-207ENST00000537063 ZNF585BQ52M93 769 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 Q6ZRG5 221 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 COMMD1Q8N668 190 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 TMEM252Q8N6L7 170 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 IL1F10Q8WWZ1 152 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 GPR146Q96CH1 333 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 SLC25A31Q9H0C2 315 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 HRH4Q9H3N8 390 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 LIN7CQ9NUP9 197 aaKnown RBP7.82□□□□□ -1.16
UBE3B-207ENST00000537063 FAM24AA6NFZ4 105 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 SSSCA1O60232 199 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 CEACAM8P31997 349 aaPredicted RBP7.82□□□□□ -1.16
UBE3B-207ENST00000537063 NKX6-1P78426 367 aaPredicted RBP7.82□□□□□ -1.16
UBE3B-207ENST00000537063 MZT1Q08AG7 82 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 MSMPQ1L6U9 139 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 FAM90A1Q86YD7 464 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 SVBPQ8N300 66 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 ZBTB34Q8NCN2 500 aa7.82□□□□□ -1.16
UBE3B-207ENST00000537063 OR10Z1Q8NGY1 313 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms