RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 C3orf80F5H4A9 247 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 RFPL4AL1F8VTS6 287 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 LYNX1G3V0Z9 82 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 H0YL77 283 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 TRIM77I1YAP6 450 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 M0R233 179 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 HSPB6O14558 160 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 ZNF205O95201 554 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 NAPSAO96009 420 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 KNG1P01042 644 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 LYNX1P0DP58 116 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 RPS2P15880 293 aaKnown RBP10.01□□□□□ -0.81
CLIP1-208ENST00000537004 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-208ENST00000537004 C4BPBP20851 252 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 TUBG1P23258 451 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 FGL1Q08830 312 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 IL13RA2Q14627 380 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 OR8G1Q15617 311 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 PXDC1Q5TGL8 231 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 BCL2L14Q9BZR8 327 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 RHOFQ9HBH0 211 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 SPACA1Q9HBV2 294 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 DYNLRB1Q9NP97 96 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 TUBG2Q9NRH3 451 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 PURGQ9UJV8 347 aaKnown RBP10.01□□□□□ -0.81
CLIP1-208ENST00000537004 A0A0B4J2A0 478 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 INAFM1C9JVW0 142 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 CTSDP07339 412 aaPredicted RBP10□□□□□ -0.81
CLIP1-208ENST00000537004 FCGR2CP31995 323 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 ZNF154Q13106 437 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 OPCMLQ14982 345 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 ANKRD55Q3KP44 614 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 Q6ZS49 121 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 SUMF2Q8NBJ7 301 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 ZNF680Q8NEM1 530 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 OR8G5Q8NG78 346 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 C10orf105Q8TEF2 133 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 TMEM100Q9NV29 134 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 PRR13Q9NZ81 148 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 SHPKQ9UHJ6 478 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 POLDIP2Q9Y2S7 368 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 VSTM5A8MXK1 200 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 CDIPTO14735 213 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 ZNF728P0DKX0 622 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 PPOXP50336 477 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 CTAG1AP78358 180 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 SRSF7Q16629 238 aaKnown RBP eCLIP10□□□□□ -0.81
CLIP1-208ENST00000537004 Q8IYB0 196 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 COQ8AQ8NI60 647 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 PPP1R1CQ8WVI7 109 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 TOMM40LQ969M1 308 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 IFT22Q9H7X7 185 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 Q9N2K0 584 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 COMMD9Q9P000 198 aa10□□□□□ -0.81
CLIP1-208ENST00000537004 TRAV24A0A0B4J272 114 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 IGHV3-64DA0A0J9YX35 117 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 C5orf51A6NDU8 294 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 TMEM210A6NLX4 147 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 MLNRO43193 412 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 TIMM8AO60220 97 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 IFNA2P01563 188 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RPA2P15927 270 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 KITLGP21583 273 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 S100A11P31949 105 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 GLP1RP43220 463 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 FXYD4P59646 89 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 ZNF718Q3SXZ3 478 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 IGSF11Q5DX21 431 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RGS7BPQ6MZT1 257 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 GSG1LQ6UXU4 331 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RDH5Q92781 318 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RAB1BQ9H0U4 201 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RAB18Q9NP72 206 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 CR1P17927 2039 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 ATRQ13535 2644 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 I3L521 148 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 GRPP07492 148 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 PGA5P0DJD9 388 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 DAOP14920 347 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 GCH1P30793 250 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RPS23P62266 143 aaKnown RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 MBNL2Q5VZF2 373 aaKnown RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 TMUB2Q71RG4 321 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 SGPP2Q8IWX5 399 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 C1orf174Q8IYL3 243 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 MOB3AQ96BX8 217 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 MFFQ9GZY8 342 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 RIMS4Q9H426 269 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-208ENST00000537004 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
CLIP1-208ENST00000537004 TEX13DA0A0J9YY54 714 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-208ENST00000537004 CRYM-AS1A6NIL9 109 aa9.98□□□□□ -0.81
CLIP1-208ENST00000537004 DEGS1O15121 323 aa9.98□□□□□ -0.81
CLIP1-208ENST00000537004 ADAP1O75689 374 aa9.98□□□□□ -0.81
CLIP1-208ENST00000537004 IFNA7P01567 189 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms