RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 VCX3AQ9NNX9 186 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 NDUFA13Q9P0J0 144 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 STX18Q9P2W9 335 aaKnown RBP3.9□□□□□ -1.79
CLIP1-207ENST00000536634 DNAH17Q9UFH2 4485 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 PKD1P98161 4303 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 TRAV27A0A087WT01 109 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 LOC105371267A0A1B0GV96 52 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 CD300LBA8K4G0 201 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 NDUFB3O43676 98 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 TYROBPO43914 113 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 CLIC3O95833 236 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 ACSM4P0C7M7 580 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 NR2C1P13056 603 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 COX7A1P24310 79 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 GUCA1AP43080 201 aaPredicted RBP3.89□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF92Q03936 586 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 NDUFA5Q16718 116 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 MEP1BQ16820 701 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 MICBQ29980 383 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 LRRC10Q5BKY1 277 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 MESTQ5EB52 335 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 WDR82Q6UXN9 313 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 BAIAP2L2Q6UXY1 529 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 MSANTD1Q6ZTZ1 278 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 C11orf42Q8N5U0 333 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 OR2AE1Q8NHA4 323 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 PCNPQ8WW12 178 aaKnown RBP3.89□□□□□ -1.79
CLIP1-207ENST00000536634 TMEM239Q8WW34 195 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 SPRYD4Q8WW59 207 aaPredicted RBP3.89□□□□□ -1.79
CLIP1-207ENST00000536634 GAFA1Q96PS6 74 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 COQ7Q99807 217 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 TMEM38AQ9H6F2 299 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 RMND5AQ9H871 391 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 EDA2RQ9HAV5 297 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 VAPAQ9P0L0 249 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 ATPIF1Q9UII2 106 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 VSIG4Q9Y279 399 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 LHFPL6Q9Y693 200 aa3.89□□□□□ -1.79
CLIP1-207ENST00000536634 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 F5H5K5 113 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 GMDSO60547 372 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 RAMP3O60896 148 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 CLN5O75503 358 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 SERPINB7O75635 380 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 ALDOBP05062 364 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 S100A6P06703 90 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 MUC1P15941 1255 aaPredicted RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 RBM34P42696 430 aaKnown RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 SLC1A6P48664 564 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 CEBPDP49716 269 aaPredicted RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 POLR2JP52435 117 aaKnown RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 LSM6P62312 80 aaKnown RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 HIST1H3AP68431 136 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 SSX2Q16385 188 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 PAGE3Q5JUK9 113 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 HIST2H3PS2Q5TEC6 136 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 UNQ9370/PRO34162Q6UXP9 181 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 SIGLEC15Q6ZMC9 328 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 HIST2H3AQ71DI3 136 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 MRPL21Q7Z2W9 205 aaKnown RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 OR4X2Q8NGF9 303 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 OR56B2PQ8NGI1 322 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 OR5D13Q8NGL4 314 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 OR9Q1Q8NGQ5 310 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 OR13C2Q8NGS9 318 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 OR51A7Q8NH64 312 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 FNDC8Q8TC99 324 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 RPS4Y2Q8TD47 263 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 UBLCP1Q8WVY7 318 aaPredicted RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 TAMM41Q96BW9 452 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 C12orf43Q96C57 262 aaKnown RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 Q96M85 177 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 P2RX4Q99571 388 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 FAM192AQ9GZU8 254 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 SLC22A4Q9H015 551 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 NSRP1Q9H0G5 558 aaKnown RBP3.88□□□□□ -1.79
CLIP1-207ENST00000536634 HDHD2Q9H0R4 259 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 SYT4Q9H2B2 425 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 RERGLQ9H628 205 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 GPR173Q9NS66 373 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 C19orf12Q9NSK7 152 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF391Q9UJN7 358 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 MGAT4AQ9UM21 535 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 AURKCQ9UQB9 309 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 ETV7Q9Y603 341 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 TNCP24821 2201 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 DSCAML1Q8TD84 2053 aa3.88□□□□□ -1.79
CLIP1-207ENST00000536634 PRSS37A4D1T9 235 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 A6NIZ1 184 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 ODF3BA8MYP8 253 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 DCTN6O00399 190 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 BHLHE40O14503 412 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 SLC16A7O60669 478 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 PFDN1O60925 122 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 RHBDL1O75783 438 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 ATP6V1G2O95670 118 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 GSTT2P0CG29 244 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 GSTT2BP0CG30 244 aa3.87□□□□□ -1.79
CLIP1-207ENST00000536634 IFI30P13284 250 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms