RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 RGS6P49758 472 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SERPINB8P50452 374 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 INSL3P51460 131 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 UBE2E1P51965 193 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 HERVK_113P61574 105 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 RPL23AP62750 156 aaKnown RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF404Q494X3 552 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 THEM4Q5T1C6 240 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 C1orf140Q5VVS0 124 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 ANKRD26P1Q6NSI1 321 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 C20orf196Q8IYI0 205 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 TRIML2Q8N7C3 387 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 OR2Z1Q8NG97 314 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 OR5D13Q8NGL4 314 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 OR1N2Q8NGR9 330 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 KLF14Q8TD94 323 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 C7orf33Q8WU49 177 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CAPSLQ8WWF8 208 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 PIGCQ92535 297 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SLC38A4Q969I6 547 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SLC35B4Q969S0 331 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 ISOC1Q96CN7 298 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 RBMXL1Q96E39 390 aaKnown RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SLC41A3Q96GZ6 507 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 COQ2Q96H96 371 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 OR2M2Q96R28 347 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SDHCQ99643 169 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 KCTD14Q9BQ13 255 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM246Q9BRR3 403 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 EBPLQ9BY08 206 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 OR11A1Q9GZK7 315 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SLC22A4Q9H015 551 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 RBKSQ9H477 322 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 ABCB10Q9NRK6 738 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 THUMPD1Q9NXG2 353 aaKnown RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 SMPD3Q9NY59 655 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 ZNRD1Q9P1U0 126 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 MYEF2Q9P2K5 600 aaKnown RBP2.28□□□□□ -2.04
SNHG1-202ENST00000535689 UGT2A1Q9Y4X1 527 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
SNHG1-202ENST00000535689 TRAV36DV7A0A075B6V5 113 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TCRBV9S1A1TA0A576 114 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TCRBV4S1A1TA0A5B7 111 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 K7N7A8 449 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 NPFFO15130 113 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 FCMRO60667 390 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 BANF1O75531 89 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 CA1P00915 261 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 RPS17P08708 135 aaKnown RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 COX5BP10606 129 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 PRPS1L1P21108 318 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 KITLGP21583 273 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 LAP3P28838 519 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 AQP1P29972 269 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 HTR1FP30939 366 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 MYCNOSP40205 109 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 UGT2B15P54855 530 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 APOC4P55056 127 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 PPP1CBP62140 327 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 ARF6P62330 175 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 OXA1LQ15070 435 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 ATP6AP1Q15904 470 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 UAP1Q16222 522 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SSX2Q16385 188 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 LRRC75BQ2VPJ9 315 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 KCTD21Q4G0X4 260 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TP53I3Q53FA7 332 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 COA6Q5JTJ3 125 aaKnown RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 ZNF678Q5SXM1 525 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 ANXA8L1Q5VT79 327 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 Q6ZN92 141 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 ZNF836Q6ZNA1 936 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 LRRC74BQ6ZQY2 392 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SLC36A1Q7Z2H8 476 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 CMC1Q7Z7K0 106 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 NUDCD3Q8IVD9 361 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SLC38A6Q8IZM9 456 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SLC26A10Q8NG04 563 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 OR56B2PQ8NGI1 322 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 OR10G9Q8NGN4 311 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SLC25A40Q8TBP6 338 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 ROPN1LQ96C74 230 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SLC25A44Q96H78 314 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SLC35G5Q96KT7 338 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 PPP3R2Q96LZ3 170 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 CCDC115Q96NT0 180 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TECTBQ96PL2 329 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TSSK3Q96PN8 268 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TRNT1Q96Q11 434 aaKnown RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 RBP7Q96R05 134 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 OR2V2Q96R30 315 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 OR2J1Q9GZK6 312 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 SIAEQ9HAT2 523 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TMEM100Q9NV29 134 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 GLTPQ9NZD2 209 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 IL36GQ9NZH8 169 aa2.27□□□□□ -2.05
SNHG1-202ENST00000535689 POLR3HQ9Y535 204 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-202ENST00000535689 TIMM10BQ9Y5J6 103 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms