RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 A0A087X0M5 115 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 A0A1B0GX30 115 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 MFNGO00587 321 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 NAPSAO96009 420 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 IGLV1-47P01700 117 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 RNASE1P07998 156 aaKnown RBP11.34□□□□□ -0.59
VPS11-205ENST00000534551 IER3P46695 156 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 LGALS4P56470 323 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 LOXL3P58215 753 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 HMGN3Q15651 99 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 SSX2Q16385 188 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 LY6EQ16553 131 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 Q6ZTK2 550 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 GPR141Q7Z602 305 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 BEND2Q8NDZ0 799 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 OR56B1Q8NGI3 324 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 OR10R2Q8NGX6 335 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 MAFIPQ8WZ33 124 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 RAB3CQ96E17 227 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 JMJD8Q96S16 334 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 TAF9BQ9HBM6 251 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 RHBDL2Q9NX52 303 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 PSG11Q9UQ72 335 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
VPS11-205ENST00000534551 COL6A5A8TX70 2615 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 H3BUX3 64 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 ORC5O43913 435 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 GLAP06280 429 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 HIST1H1DP16402 221 aaKnown RBP11.33□□□□□ -0.6
VPS11-205ENST00000534551 RAB13P51153 203 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 FAM189A2Q15884 450 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 LRRC75BQ2VPJ9 315 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 HLA-DRB5Q30154 266 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 C6orf183Q5T699 404 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 OR52W1Q6IF63 320 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 ZNF880Q6PDB4 577 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 IZUMO1Q8IYV9 350 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 DTX3Q8N9I9 347 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 OR52L2PQ8NGH6 319 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 RBMXL1Q96E39 390 aaKnown RBP11.33□□□□□ -0.6
VPS11-205ENST00000534551 SSX3Q99909 188 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
VPS11-205ENST00000534551 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
VPS11-205ENST00000534551 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 F2RL2O00254 374 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 CA11O75493 328 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 ACTG1P63261 375 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 HLA-DRB3P79483 266 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 CLVS1Q8IUQ0 354 aaPredicted RBP11.32□□□□□ -0.6
VPS11-205ENST00000534551 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 FAM216AQ8WUB2 273 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
VPS11-205ENST00000534551 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
VPS11-205ENST00000534551 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
VPS11-205ENST00000534551 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 CLDN34H7C241 214 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 J3QR06 171 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 TOR1AO14656 332 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 GPR137BO60478 399 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 PTHLHP12272 177 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 GZMHP20718 246 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 CD24P25063 80 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 HTR1DP28221 377 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 PPP1CCP36873 323 aaKnown RBP11.31□□□□□ -0.6
VPS11-205ENST00000534551 MADCAM1Q13477 382 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 SPCS2Q15005 226 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 TPTE2P1Q5T6R2 138 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 ZNF439Q8NDP4 499 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 ZNF596Q8TC21 504 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 IL1F10Q8WWZ1 152 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 PTX4Q96A99 478 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 SLC25A46Q96AG3 418 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 MMP28Q9H239 520 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 DCSTAMPQ9H295 470 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 GNG12Q9UBI6 72 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 ZNF230Q9UIE0 474 aaPredicted RBP11.31□□□□□ -0.6
VPS11-205ENST00000534551 VPREB3Q9UKI3 123 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 ETV7Q9Y603 341 aa11.31□□□□□ -0.6
VPS11-205ENST00000534551 IGKV1D-8A0A087WSZ0 117 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 H3BUI4 141 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 SPINT2O43291 252 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 CHST1O43916 411 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 FCGR3AP08637 254 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 SCTP09683 121 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 CD3GP09693 182 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 REG1BP48304 166 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 RELBQ01201 579 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 HERPUD1Q15011 391 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 MINOS1Q5TGZ0 78 aa11.3□□□□□ -0.6
VPS11-205ENST00000534551 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms