RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CCL7P80098 99 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 ADIRFQ15847 76 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 FAM189A2Q15884 450 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 C16orf54Q6UWD8 224 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 CYP2G1PQ6ZSU1 146 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 TMEM59Q9BXS4 323 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 MAGT1Q9H0U3 335 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 NAA60Q9H7X0 242 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 PNRC2Q9NPJ4 139 aaKnown RBP16.5■□□□□ 0.23
SMPD1-210ENST00000534405 PRSS50Q9UI38 385 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 PPIAL4AQ9Y536 164 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF878C9JN71 531 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF121P58317 390 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-210ENST00000534405 SLC25A47Q6Q0C1 308 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 Q6ZWC4 215 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 ABHD12BQ7Z5M8 362 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-210ENST00000534405 REEP6Q96HR9 211 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 TMEM9BQ9NQ34 198 aa16.5■□□□□ 0.23
SMPD1-210ENST00000534405 MRPS28Q9Y2Q9 187 aaKnown RBP16.5■□□□□ 0.23
SMPD1-210ENST00000534405 IGHV5-10-1A0A0J9YXX1 117 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 A0A1W2PP11 408 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 C5orf63A6NC05 138 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 ZFP92A6NM28 416 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 GDF9O60383 454 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 LILRA1O75019 489 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 ZFAND5O76080 213 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 DKK1O94907 266 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 CNOT4O95628 575 aaKnown RBP16.49■□□□□ 0.23
SMPD1-210ENST00000534405 OR3A4PP47883 348 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 UBE2G2P60604 165 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 SP6Q3SY56 376 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 COMMD2Q86X83 199 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 OR2T10Q8NGZ9 312 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 VPS25Q9BRG1 176 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 BANF2Q9H503 90 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 FSCN3Q9NQT6 498 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 SLC45A2Q9UMX9 530 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 CHD3Q12873 2000 aaKnown RBP16.49■□□□□ 0.23
SMPD1-210ENST00000534405 IGHV2-70DA0A0C4DH43 119 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 E9PLN8 166 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF20P17024 532 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 PIGPP57054 158 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 BSXQ3C1V8 233 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 LGI3Q8N145 548 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF552Q9H707 407 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-210ENST00000534405 PLEKHF2Q9H8W4 249 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 RARRES3Q9UL19 164 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 RPH3ALQ9UNE2 315 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 COX11Q9Y6N1 276 aa16.49■□□□□ 0.23
SMPD1-210ENST00000534405 NCOA6Q14686 2063 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-210ENST00000534405 K7ESF4 209 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 ARL6IP1Q15041 203 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 MORN2Q502X0 79 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 PRAMEF20Q5VT98 475 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 LIAT1Q6ZQX7 453 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 FAM71F1Q96KD3 344 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-210ENST00000534405 LYRM2Q9NU23 88 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-210ENST00000534405 JMJD7P0C870 316 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 RUNX1Q01196 453 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF738Q8NE65 137 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 HSPB7Q9UBY9 170 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 PI4KAP42356 2102 aa16.48■□□□□ 0.23
SMPD1-210ENST00000534405 CCDC85CA6NKD9 419 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 SRP14P37108 136 aaKnown RBP16.47■□□□□ 0.23
SMPD1-210ENST00000534405 PAFAH1B2P68402 229 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 CST9LP1Q5W188 147 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 OR5T1Q8NG75 326 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 OR5C1Q8NGR4 320 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 SPACA9Q96E40 222 aaPredicted RBP16.47■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF665Q9H7R5 613 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 CELA2AP08217 269 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 HOXC12P31275 282 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 RPL15P61313 204 aaKnown RBP16.47■□□□□ 0.23
SMPD1-210ENST00000534405 FAM89BQ8N5H3 189 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 CMTM2Q8TAZ6 248 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 NUDT11Q96G61 164 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 OR51I2Q9H344 312 aa16.47■□□□□ 0.23
SMPD1-210ENST00000534405 CD33P20138 364 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 TAS2R30P59541 319 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 RPL23P62829 140 aaKnown RBP16.46■□□□□ 0.23
SMPD1-210ENST00000534405 HIST3H3Q16695 136 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 TMEM252Q8N6L7 170 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 ANAPC16Q96DE5 110 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 OXGR1Q96P68 337 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 MOB1AQ9H8S9 216 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 LAMTOR2Q9Y2Q5 125 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 IGKV1-9A0A0C4DH69 117 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 A0A1B0GUS0 222 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 FOXI3A8MTJ6 420 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-210ENST00000534405 HPNP05981 417 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 LCN2P80188 198 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 CLEC12BQ2HXU8 276 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 FBLN7Q53RD9 439 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 ZNF787Q6DD87 383 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 FAM57BQ71RH2 274 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 DTX1Q86Y01 620 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 Q8NFD4 153 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 OR4C5Q8NGB2 326 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 OR4B1Q8NGF8 309 aa16.46■□□□□ 0.23
SMPD1-210ENST00000534405 MSI2Q96DH6 328 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms