RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SPIN2BQ9BPZ2 258 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 GLRX2Q9NS18 164 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 BOD1L1Q8NFC6 3051 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 TSPAN15O95858 294 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 PGA5P0DJD9 388 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 PSG2P11465 335 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 CD82P27701 267 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 KIR2DL2P43627 348 aaPredicted RBP12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 MRPL49Q13405 166 aaKnown RBP12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 AKR1E2Q96JD6 320 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 RNF115Q9Y4L5 304 aa12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
CACNA1E-208ENST00000533229 DUXBA0A1W2PPF3 345 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 CHST1O43916 411 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 CST7O76096 145 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 GRPP07492 148 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 RAC2P15153 192 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 LMO1P25800 156 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 CAMLGP49069 296 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 CEBPDP49716 269 aaPredicted RBP12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 C9orf106Q8NAJ2 232 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 OR10V1Q8NGI7 309 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 KLF14Q8TD94 323 aaPredicted RBP12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 PLEKHF2Q9H8W4 249 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 C19orf12Q9NSK7 152 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 LUZP4Q9P127 313 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 IQCF6A8MYZ5 107 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 H7C2Y5 167 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 NXPH2O95156 264 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 IGKV1-39P01597 117 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 IGKV1D-39P04432 117 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 PVALBP20472 110 aaPredicted RBP12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 PAX9P55771 341 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 FOXF2Q12947 444 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 ZNF146Q15072 292 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 SHEQ5VZ18 495 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 IGFL2Q6UWQ7 119 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 Q6ZRM9 215 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 CXorf67Q86X51 503 aaPredicted RBP12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 OR5C1Q8NGR4 320 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 GPR146Q96CH1 333 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 TREM2Q9NZC2 230 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 TINAGQ9UJW2 476 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 TRAPPC2LQ9UL33 140 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 POLDIP2Q9Y2S7 368 aa12.97□□□□□ -0.33
CACNA1E-208ENST00000533229 OTOGLQ3ZCN5 2332 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 ESPL1Q14674 2120 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 NPIPB11E5RHQ5 1161 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 PITX3O75364 302 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 PRH1P02810 166 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 EPHA1P21709 976 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 RPL35P42766 123 aaKnown RBP12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 PPT1P50897 306 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 INO80CQ6PI98 192 aaPredicted RBP12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 ETV3LQ6ZN32 361 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 TMEM217Q8N7C4 229 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 WDR31Q8NA23 367 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 IL22RA2Q969J5 263 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 ABHD14AQ9BUJ0 271 aa12.96□□□□□ -0.33
CACNA1E-208ENST00000533229 A0A1B0GV50 99 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 MLNRO43193 412 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 PSPNO60542 156 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 IGKV3-15P01624 115 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 ATP6V0CP27449 155 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF826PQ6ZT77 177 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 Q8IYB0 196 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF295-AS1Q8N0V1 137 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 MLXQ9UH92 298 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 K7N7A8 449 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 WNT9BO14905 357 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 PPP1CCP36873 323 aaKnown RBP12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 MDH2P40926 338 aaKnown RBP12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 DYNLT3P51808 116 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 VAMP2P63027 116 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 OR8G1Q15617 311 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 GUK1Q16774 197 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 C11orf53Q8IXP5 236 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 ABHD14BQ96IU4 210 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 MBNL3Q9NUK0 354 aaKnown RBP12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 PPP1R3CQ9UQK1 317 aa12.95□□□□□ -0.34
CACNA1E-208ENST00000533229 TFF1P04155 84 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 HEXAP06865 529 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 SERPINE2P07093 398 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 RAB5CP51148 216 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF266Q14584 549 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 FAM213BQ8TBF2 198 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 SLC25A31Q9H0C2 315 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 ESRP2Q9H6T0 727 aaKnown RBP12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 OBP2BQ9NPH6 170 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 OR14J1Q9UGF5 321 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 WIPI2Q9Y4P8 454 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 AQP7O14520 342 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 SH2D1BO14796 132 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 HSPA12AO43301 675 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 CBR1P16152 277 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms