RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 KIRREL1Q96J84 757 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 CMTM3Q96MX0 182 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 SLIRPQ9GZT3 109 aaKnown RBP11.43□□□□□ -0.58
USF1-209ENST00000529476 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 TAF9BQ9HBM6 251 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.43□□□□□ -0.58
USF1-209ENST00000529476 IDI2-AS1Q9NZ38 188 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 ZNF69Q9UC07 566 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 CTDSP2O14595 271 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 WIPF1O43516 503 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 XRCC3O43542 346 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 HBZP02008 142 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 FCGR3AP08637 254 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 PTHLHP12272 177 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 EPHA1P21709 976 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 NFYBP25208 207 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 UBE2E1P51965 193 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 MRPS15P82914 257 aaKnown RBP11.42□□□□□ -0.58
USF1-209ENST00000529476 GUCA2AQ02747 115 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 HACD4Q5VWC8 232 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 FAM53AQ6NSI3 398 aaPredicted RBP11.42□□□□□ -0.58
USF1-209ENST00000529476 TRAT1Q6PIZ9 186 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 MOB1BQ7L9L4 216 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 BCL6BQ8N143 479 aaPredicted RBP11.42□□□□□ -0.58
USF1-209ENST00000529476 PRR18Q8N4B5 295 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 OR1L1Q8NH94 360 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 NUDCD2Q8WVJ2 157 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 MS4A7Q9GZW8 240 aaPredicted RBP11.42□□□□□ -0.58
USF1-209ENST00000529476 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 AUNIPQ9H7T9 357 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 Q9N2K0 584 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 KCNIP1Q9NZI2 227 aa11.42□□□□□ -0.58
USF1-209ENST00000529476 CUBNO60494 3623 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 IGHV2-26A0A0B4J1V2 119 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 FAM25AB3EWG3 89 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 FAM25CB3EWG5 89 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 FAM25GB3EWG6 89 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 NPFFO15130 113 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 RGS5O15539 181 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 SPINT2O43291 252 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 SSX5O60225 188 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 FPR2P25090 351 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 TALDO1P37837 337 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 TAS2R20P59543 309 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 GNG2P59768 71 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 MADCAM1Q13477 382 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 HMGN3Q15651 99 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 TMEM69Q5SWH9 247 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 OR52W1Q6IF63 320 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 LAX1Q8IWV1 398 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 OR13D1Q8NGV5 346 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 MCFD2Q8NI22 146 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 MAFIPQ8WZ33 124 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 LEAP2Q969E1 77 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 C6orf62Q9GZU0 229 aaPredicted RBP11.41□□□□□ -0.58
USF1-209ENST00000529476 ZNF286AQ9HBT8 521 aa11.41□□□□□ -0.58
USF1-209ENST00000529476 ZNF230Q9UIE0 474 aaPredicted RBP11.41□□□□□ -0.58
USF1-209ENST00000529476 A0A087X0M5 115 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 IGHV3-43A0A0B4J1X8 118 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 A0A1B0GX30 115 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 A6NHS1 94 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 F2RL2O00254 374 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 SDCBPO00560 298 aaPredicted RBP11.4□□□□□ -0.58
USF1-209ENST00000529476 IGHV3-7P01780 117 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 MELTFP08582 738 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 IGHV3-43DP0DP04 118 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 LOXL3P58215 753 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 C9orf139Q6ZV77 190 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 ZNF554Q86TJ5 538 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 ABHD12Q8N2K0 398 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 OR11H6Q8NGC7 330 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 OR10A7Q8NGE5 316 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 NXF2Q9GZY0 626 aaKnown RBP11.4□□□□□ -0.58
USF1-209ENST00000529476 EXTL2Q9UBQ6 330 aa11.4□□□□□ -0.58
USF1-209ENST00000529476 SVEP1Q4LDE5 3571 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 MEIOCA2RUB1 952 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 POM121CA8CG34 1229 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 ODF3BA8MYP8 253 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 ARG1P05089 322 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 SCTP09683 121 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 CD34P28906 385 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 SAA4P35542 130 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 MNDAP41218 407 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 BPIFB3P59826 476 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 HLA-DRB3P79483 266 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 PITPNAQ00169 270 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 GNMTQ14749 295 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 ZNF626Q68DY1 528 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 OR52L2PQ8NGH6 319 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 OR10V1Q8NGI7 309 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 OR52M1Q8NGK5 317 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 TMEM158Q8WZ71 300 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 GCDHQ92947 438 aaPredicted RBP11.39□□□□□ -0.59
USF1-209ENST00000529476 SLC6A7Q99884 636 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 RAB9BQ9NP90 201 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 GFOD1Q9NXC2 390 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms