RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	IFNA17	P01571	189 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	ITGA3	P26006	1051 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	OR1C1	Q15619	314 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	RBMS3	Q6XE24	437 aa	Known RBP	19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	CLDND2	Q8NHS1	167 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	RDH5	Q92781	318 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	FAM166B	A8MTA8	275 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	HS3ST1	O14792	307 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	SERPINE2	P07093	398 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	APLNR	P35414	380 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	WNT5A	P41221	380 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	HAGH	Q16775	308 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	KHDC3L	Q587J8	217 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	TMEM251	Q8N6I4	163 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	OR10V1	Q8NGI7	309 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	RAB39B	Q96DA2	213 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	OR51I2	Q9H344	312 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	TREM2	Q9NZC2	230 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	ERRFI1	Q9UJM3	462 aa	Predicted RBP	19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	WSB1	Q9Y6I7	421 aa		19.9	■□□□□ 0.78
GSDMD-208	ENST00000528475	AP4M1	O00189	453 aa		19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR8U8	P0C7N1	319 aa		19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	CBR1	P16152	277 aa		19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	MDH2	P40926	338 aa	Known RBP	19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	MOB1B	Q7L9L4	216 aa		19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR10G4	Q8NGN3	311 aa		19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	ZNF251	Q9BRH9	671 aa		19.89	■□□□□ 0.77
GSDMD-208	ENST00000528475	C9orf172	C9J069	976 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475		J3QT63	122 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	LILRA1	O75019	489 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	NXPH3	O95157	252 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	IFNA5	P01569	189 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	ZNF883	P0CG24	379 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	PSG2	P11465	335 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475		Q6P435	159 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	NUFIP2	Q7Z417	695 aa	Known RBP	19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	TMEM105	Q8N8V8	129 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	NANP	Q8TBE9	248 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	GPR87	Q9BY21	358 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	CNOT4	O95628	575 aa	Known RBP	19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	JMJD7	P0C870	316 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	FREM1	Q5H8C1	2179 aa		19.88	■□□□□ 0.77
GSDMD-208	ENST00000528475	COL6A3	P12111	3177 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	ZNF429	Q86V71	674 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR51H1	Q8NH63	302 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	TCTEX1D2	Q8WW35	142 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	C21orf140	B9A014	251 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	UBE2K	P61086	200 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	CLN3	Q13286	438 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	MCEMP1	Q8IX19	187 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	C17orf78	Q8N4C9	275 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	TVP23C	Q96ET8	276 aa		19.87	■□□□□ 0.77
GSDMD-208	ENST00000528475	CXorf65	A6NEN9	183 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	IGLV2-14	P01704	120 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	ZNF806	P0C7X5	589 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	TAGLN2	P37802	199 aa	Known RBP	19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR2B8P	P59922	312 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	SLC16A13	Q7RTY0	426 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	SLC35E3	Q7Z769	313 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	CYB561D1	Q8N8Q1	229 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR1K1	Q8NGR3	316 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	GP6	Q9HCN6	339 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	SIRT7	Q9NRC8	400 aa		19.86	■□□□□ 0.77
GSDMD-208	ENST00000528475	LOC102723971	A0A1B0GUV8	181 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	SLC33A1	O00400	549 aa	Predicted RBP	19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	IGKV1-39	P01597	117 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	IGKV1D-39	P04432	117 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	CD200	P41217	278 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	PLGLB1	Q02325	96 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	THNSL2	Q86YJ6	484 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	SMOC1	Q9H4F8	434 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR1A1	Q9P1Q5	309 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	WDFY3	Q8IZQ1	3526 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	NQO2	P16083	231 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	TESK1	Q15569	626 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	ACSF3	Q4G176	576 aa	Predicted RBP	19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	DCAF10	Q5QP82	559 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475		Q6ZRM9	215 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	NANOS1	Q8WY41	292 aa	Known RBP	19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	BCL2L2	Q92843	193 aa	Predicted RBP	19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	TCEAL3	Q969E4	200 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	NIPSNAP3B	Q9BS92	247 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	PSMG3	Q9BT73	122 aa	Predicted RBP	19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475	PRSS50	Q9UI38	385 aa		19.85	■□□□□ 0.77
GSDMD-208	ENST00000528475		H0YL77	283 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475		J3QW42	95 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	SYNGR2	O43760	224 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	RHBDL1	O75783	438 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	IL18BP	O95998	194 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	CA6	P23280	308 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	EIF2S3	P41091	472 aa	Known RBP	19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	DLK1	P80370	383 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	OR2T2	Q6IF00	324 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475		Q8IYB0	196 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	RNASE11	Q8TAA1	199 aa	Known RBP	19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	FOXJ2	Q9P0K8	574 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	RNF150	Q9ULK6	438 aa		19.84	■□□□□ 0.77
GSDMD-208	ENST00000528475	TMEM267	Q0VDI3	215 aa	Predicted RBP	19.83	■□□□□ 0.77
GSDMD-208	ENST00000528475	ZNF497	Q6ZNH5	498 aa		19.83	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms