RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ADORA2BP29275 332 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 TSPOP30536 169 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 PYCR1P32322 319 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 ERFP50548 548 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 RND2P52198 227 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 ARPP19P56211 112 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 RAB25P57735 213 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 ZNF79Q15937 498 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 CEACAM16Q2WEN9 425 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 TNFAIP8L2Q6P589 184 aaPredicted RBP4.13□□□□□ -1.75
PCF11-202ENST00000528336 Q6ZN92 141 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 NPWQ8N729 165 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 OR4F15Q8NGB8 312 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 NT5CQ8TCD5 201 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 SPPL2BQ8TCT7 592 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 MAFIPQ8WZ33 124 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 BORCS5Q969J3 196 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 YIPF5Q969M3 257 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 SFRP2Q96HF1 295 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 PHB2Q99623 299 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 PECRQ9BY49 303 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 EXOSC4Q9NPD3 245 aaKnown RBP4.13□□□□□ -1.75
PCF11-202ENST00000528336 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 VAX2Q9UIW0 290 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 ANXA10Q9UJ72 324 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 RAB22AQ9UL26 194 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 TRAPPC4Q9Y296 219 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 PRUNE2Q8WUY3 3088 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 BRWD1Q9NSI6 2320 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 EYSQ5T1H1 3165 aa4.13□□□□□ -1.75
PCF11-202ENST00000528336 PRRC2AP48634 2157 aaKnown RBP4.13□□□□□ -1.75
PCF11-202ENST00000528336 COL6A3P12111 3177 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 TSC2P49815 1807 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 REV3LO60673 3130 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 A0A0G2JRQ6 117 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 PLIN3O60664 434 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 FOXH1O75593 365 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 UPK1BO75841 260 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 AIFM1O95831 613 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 PAEPP09466 180 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 SLC35G6P0C7Q6 338 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 LINC00614P0C842 121 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 AKR1C4P17516 323 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 RCC1P18754 421 aaPredicted RBP4.12□□□□□ -1.75
PCF11-202ENST00000528336 MYL12AP19105 171 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 MYCNOSP40205 109 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 RPL5P46777 297 aaKnown RBP4.12□□□□□ -1.75
PCF11-202ENST00000528336 KLK7P49862 253 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 ZNF235Q14590 738 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 IHHQ14623 411 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 GLT6D1Q7Z4J2 308 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 OR2Z1Q8NG97 314 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 ASB17Q8WXJ9 295 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 PPCDCQ96CD2 204 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 SMARCD1Q96GM5 515 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 BTN2A3PQ96KV6 586 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 BIRC8Q96P09 236 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 SULT4A1Q9BR01 284 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 KCNJ16Q9NPI9 418 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 PARVAQ9NVD7 372 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 ARMC1Q9NVT9 282 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 DNAJC12Q9UKB3 198 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 SLC22A7Q9Y694 548 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 XIRP2A4UGR9 3374 aa4.12□□□□□ -1.75
PCF11-202ENST00000528336 C2orf16Q68DN1 1984 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 TRAV39A0A0B4J263 110 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 A0A0B4J2A0 478 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 IGKV1D-13A0A0B4J2D9 117 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 C12orf77C9JDV5 145 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 H7C1H1 209 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 M0QZK8 103 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 MFNGO00587 321 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 CCL16O15467 120 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 SUPT3HO75486 399 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 IGKV1D-16P01601 117 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 P0C879 139 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 IGKV1-13P0DP09 117 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 GGT1P19440 569 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 F2RP25116 425 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 ARG2P78540 354 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 PRR3P79522 188 aaKnown RBP4.11□□□□□ -1.75
PCF11-202ENST00000528336 PPP1R1AQ13522 171 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
PCF11-202ENST00000528336 CYHR1Q6ZMK1 362 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 OLIG3Q7RTU3 272 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 ZFP41Q8N8Y5 198 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 OR10G3Q8NGC4 313 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 OR2A12Q8NGT7 310 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 SMIM12Q96EX1 92 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 PHYHIPLQ96FC7 376 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 PGLYRP3Q96LB9 341 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 HIST1H4GQ99525 98 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 FAM49BQ9NUQ9 324 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 XCL2Q9UBD3 114 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 SHPKQ9UHJ6 478 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 V9GY05 133 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 ATG2AQ2TAZ0 1938 aa4.11□□□□□ -1.75
PCF11-202ENST00000528336 TTC28Q96AY4 2481 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms