RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZFAND5O76080 213 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 IAPPP10997 89 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 HBG1P69891 147 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 HBG2P69892 147 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 RTP5Q14D33 572 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 CALHM1Q8IU99 346 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 UCN2Q96RP3 112 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 MTIF3Q9H2K0 278 aaKnown RBP12.56□□□□□ -0.4
CAPN1-214ENST00000528165 FKBP11Q9NYL4 201 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 SOX15O60248 233 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 VAMP5O95183 116 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 F2RP25116 425 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 TDGF1P3P51864 188 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 GNB2P62879 340 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 HERPUD1Q15011 391 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 CENPVQ7Z7K6 275 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-214ENST00000528165 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
CAPN1-214ENST00000528165 SZT2Q5T011 3432 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 LMO7DNF2Z398 122 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 TUSC2O75896 110 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 PIAS2O75928 621 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 MBP02144 154 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 SLC25A6P12236 298 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 CD38P28907 300 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 KIR2DS4P43632 304 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 TLE1Q04724 770 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 KIR2DS1Q14954 304 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 DAZAP2Q15038 168 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-214ENST00000528165 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
CAPN1-214ENST00000528165 IZUMO4Q1ZYL8 232 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 C1orf194Q5T5A4 169 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 RHBDD2Q6NTF9 364 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 OR51H1Q8NH63 302 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 SYNGR2O43760 224 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 CST2P09228 141 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 PSMB3P49720 205 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 VEGFBP49765 207 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 ARL16Q0P5N6 197 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 CISD2Q8N5K1 135 aaKnown RBP12.55□□□□□ -0.4
CAPN1-214ENST00000528165 FADS6Q8N9I5 356 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF391Q9UJN7 358 aa12.55□□□□□ -0.4
CAPN1-214ENST00000528165 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 KIAA1324LA8MWY0 1029 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 TMEM250H0YL14 139 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 CTXN2P0C2S0 81 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 CNN1P51911 297 aaKnown RBP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF92Q03936 586 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 TESK1Q15569 626 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 SRSF7Q16629 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 MRPL30Q8TCC3 161 aaKnown RBP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 SPACA9Q96E40 222 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 PARLQ9H300 379 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF816-ZNF321PA0A0X1KG74 233 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 HSPB6O14558 160 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 NAPSAO96009 420 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 WDR61Q9GZS3 305 aaKnown RBP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 CACNG5Q9UF02 275 aa12.54□□□□□ -0.4
CAPN1-214ENST00000528165 CHD3Q12873 2000 aaKnown RBP12.54□□□□□ -0.4
CAPN1-214ENST00000528165 GGCTO75223 188 aaKnown RBP12.53□□□□□ -0.4
CAPN1-214ENST00000528165 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 PSG2P11465 335 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 CLDN15P56746 228 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 KCNIP4Q6PIL6 250 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 WFIKKN1Q96NZ8 548 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 TECTBQ96PL2 329 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 WNT16Q9UBV4 365 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A10PA6NDY2 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A18PA6NE21 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A16PA6NEW6 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A20PA6NIJ5 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A8PA6NJQ4 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A7PA6NKC0 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 MARCH11A6NNE9 402 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 CD300LBA8K4G0 201 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A22PA8MWA6 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A12PA8MX19 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A5PA8MXJ8 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A23PA8MXZ1 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A15PP0C7V4 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A13PP0C7W8 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A14PP0C7W9 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 FAM90A24PP0C7X0 464 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 ZNF32P17041 273 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 SRP14P37108 136 aaKnown RBP12.53□□□□□ -0.4
CAPN1-214ENST00000528165 RASL10BQ96S79 203 aa12.53□□□□□ -0.4
CAPN1-214ENST00000528165 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-214ENST00000528165 IGKV1-6A0A0C4DH72 117 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms