RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 S100A16Q96FQ6 103 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 NXF2Q9GZY0 626 aaKnown RBP9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 ESM1Q9NQ30 184 aa9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 C12orf4Q9NQ89 552 aa9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 DIABLOQ9NR28 239 aa9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 TRAPPC2LQ9UL33 140 aa9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 UBE2J1Q9Y385 318 aaPredicted RBP9.44□□□□□ -0.9
CCDC90B-210ENST00000528149 A0A0A6YYH2 397 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 A0A1W2PPH5 198 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 A6NJ64 397 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 ZNF729A6NN14 1252 aaPredicted RBP9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 SERPINE3A8MV23 424 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 XRCC3O43542 346 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 CA11O75493 328 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 EPHA1P21709 976 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 TAS2R20P59543 309 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 GNG2P59768 71 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 LTC4SQ16873 150 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 C17orf58Q2M2W7 97 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 CNIH2Q6PI25 160 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 BRD3OSQ6XYD6 125 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 PNKDQ8N490 385 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 C11orf42Q8N5U0 333 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 RFESDQ8TAC1 157 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 MAFIPQ8WZ33 124 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 CORO2AQ92828 525 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 UPRTQ96BW1 309 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 DUX5Q96PT3 197 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 GAL3ST2Q9H3Q3 398 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 NCOR1P1Q9H4R4 102 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.93e-11■■■■■ 43.7
CCDC90B-210ENST00000528149 TAS2R3Q9NYW6 316 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 EXTL2Q9UBQ6 330 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 ZNF69Q9UC07 566 aa9.43□□□□□ -0.9
CCDC90B-210ENST00000528149 A0A1W2PRD5 423 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 A0A1W2PRF3 423 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 A0A1W2PRM7 423 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 C17orf98A8MV24 154 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 C12orf77C9JDV5 145 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 C15orf65H3BRN8 121 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 SSX5O60225 188 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 FCGR3AP08637 254 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 CGB3P0DN86 165 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 CGB7P0DN87 165 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 COX7A1P24310 79 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 PAX6P26367 422 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 MRPS15P82914 257 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 CNPY1Q3B7I2 92 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 UTF1Q5T230 341 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 C6orf183Q5T699 404 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 HACD4Q5VWC8 232 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 PRR18Q8N4B5 295 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 OR1L1Q8NH94 360 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 LHX4Q969G2 390 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 ARL11Q969Q4 196 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 DMRTB1Q96MA1 342 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 CMTM3Q96MX0 182 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 SUCNR1Q9BXA5 334 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 AUNIPQ9H7T9 357 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 METTL8Q9H825 291 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 BATF3Q9NR55 127 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 MBNL3Q9NUK0 354 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 ZNF230Q9UIE0 474 aaPredicted RBP9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 ADAM30Q9UKF2 790 aa9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 MRPS7Q9Y2R9 242 aaKnown RBP9.42□□□□□ -0.9
CCDC90B-210ENST00000528149 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 IGHV3-43A0A0B4J1X8 118 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 MEIS3P1A6NDR6 274 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 RNASEK-C17orf49H0YIS7 233 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 HBZP02008 142 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 RBP4P02753 201 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 FCER2P06734 321 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 IGHV1-8P0DP01 117 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 IGHV3-43DP0DP04 118 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 NFYBP25208 207 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 TALDO1P37837 337 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 MNDAP41218 407 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 ARL6IP1Q15041 203 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 HMGN3Q15651 99 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 PNLIPRP3Q17RR3 467 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 RNASE12Q5GAN4 147 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 HCP5Q6MZN7 132 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 FAM53AQ6NSI3 398 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 ZNF880Q6PDB4 577 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 TRAT1Q6PIZ9 186 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 HEPN1Q6WQI6 88 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 SNX29P2Q8IUI4 249 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 KIRREL1Q96J84 757 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 RIMS4Q9H426 269 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 TAF9BQ9HBM6 251 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 Q9N2K0 584 aa9.41□□□□□ -0.9
CCDC90B-210ENST00000528149 IDI2-AS1Q9NZ38 188 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms