RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 PIGMQ9H3S5 423 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 TMEM231Q9H6L2 316 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 CDH20Q9HBT6 801 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 MOV10Q9HCE1 1003 aaKnown RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 CYSLTR2Q9NS75 346 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 STARD10Q9Y365 291 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 RBMX2Q9Y388 322 aaKnown RBP3.53□□□□□ -1.84
CD44-226ENST00000527889 NPTNQ9Y639 398 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 CSPG4Q6UVK1 2322 aa3.53□□□□□ -1.84
CD44-226ENST00000527889 IGKV1-27A0A075B6S5 117 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 IGHV2OR16-5A0A0B4J2B6 119 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 A0A1B0GW15 77 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 A0A1W2PP11 408 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 GGT3PA6NGU5 568 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ZNF98A6NK75 572 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 OR5H1A6NKK0 313 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 OR2AT4A6NND4 320 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ZNF850A8MQ14 1090 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SERPINE3A8MV23 424 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ATP6V1G2-DDX39BF2Z307 99 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 HSPB6O14558 160 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 VCYO14598 125 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 LANCL1O43813 399 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SSX4O60224 188 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 JTBO76095 146 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 NRASP01111 189 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CD37P11049 281 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 IL7P13232 177 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 PRF1P14222 555 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SPNP16150 400 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CBR1P16152 277 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ZNF12P17014 697 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 DNASE1P24855 282 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CDK2P24941 298 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CALCRP30988 508 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CCKARP32238 428 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 OPRM1P35372 400 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ZNF93P35789 620 aaPredicted RBP3.52□□□□□ -1.85
CD44-226ENST00000527889 TALDO1P37837 337 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 KCNJ3P48549 501 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 RAB9AP51151 201 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ART1P52961 327 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 GNG2P59768 71 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 PPP1CBP62140 327 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 DGCR2P98153 550 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 FAM27E3Q08E93 113 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 UNC119Q13432 240 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 P2RY6Q15077 328 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CDSNQ15517 529 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 OR8B8Q15620 311 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 IGFBP7Q16270 282 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 GUK1Q16774 197 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ZNF181Q2M3W8 571 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 EIF2S3LQ2VIR3 472 aaKnown RBP3.52□□□□□ -1.85
CD44-226ENST00000527889 ALKBH6Q3KRA9 238 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CHRFAM7AQ494W8 412 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 C1orf100Q5SVJ3 147 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 HACD4Q5VWC8 232 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CRIP3Q6Q6R5 217 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 GLIPR1L1Q6UWM5 242 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 Q6YL49 198 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 Q6ZSR3 168 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SSX9Q7RTT3 188 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 C1QL2Q7Z5L3 287 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ANGPTL5Q86XS5 388 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 LYPD6Q86Y78 171 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 Q8N402 240 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ACBD4Q8NC06 268 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 OR6M1Q8NGM8 313 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 OR10K1Q8NGX5 313 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 KCNG3Q8TAE7 436 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 LHFPL5Q8TAF8 219 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SLC25A40Q8TBP6 338 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SSC4DQ8WTU2 575 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 C22orf15Q8WYQ4 148 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 MAFIPQ8WZ33 124 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 FAM46BQ96A09 425 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CYYR1Q96J86 154 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 RITA1Q96K30 269 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SORCS2Q96PQ0 1159 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 PCGF1Q9BSM1 259 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CCDC32Q9BV29 185 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ACTR6Q9GZN1 396 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 CHST5Q9GZS9 411 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 FGF23Q9GZV9 251 aaPredicted RBP3.52□□□□□ -1.85
CD44-226ENST00000527889 METTL9Q9H1A3 318 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ATG5Q9H1Y0 275 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 BANF2Q9H503 90 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 METTL17Q9H7H0 456 aaPredicted RBP3.52□□□□□ -1.85
CD44-226ENST00000527889 TMEM138Q9NPI0 162 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 YAE1D1Q9NRH1 226 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 NPAP1Q9NZP6 1156 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ZNF629Q9UEG4 869 aaPredicted RBP3.52□□□□□ -1.85
CD44-226ENST00000527889 FZR1Q9UM11 496 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ING4Q9UNL4 249 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 LAMP3Q9UQV4 416 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 MRPS28Q9Y2Q9 187 aaKnown RBP3.52□□□□□ -1.85
CD44-226ENST00000527889 AMDHD2Q9Y303 409 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 ETV7Q9Y603 341 aa3.52□□□□□ -1.85
CD44-226ENST00000527889 SLC25A15Q9Y619 301 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms