RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PLSCR4Q9NRQ2 329 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 CELSR3Q9NYQ7 3312 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 TNFSF12O43508 249 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 TESK1Q15569 626 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 ALKBH6Q3KRA9 238 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 MIDNQ504T8 468 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 FAM122CQ6P4D5 195 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 C1orf174Q8IYL3 243 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 LSM10Q969L4 123 aaKnown RBP12.99□□□□□ -0.33
USH1C-207ENST00000527720 OBP2BQ9NPH6 170 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 OR1A1Q9P1Q5 309 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 NDRG3Q9UGV2 375 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 OTOGLQ3ZCN5 2332 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 C1QTNF9BB2RNN3 333 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 WRBO00258 174 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 HSPA12AO43301 675 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 CEACAM4O75871 244 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 WT1P19544 449 aaPredicted RBP12.98□□□□□ -0.33
USH1C-207ENST00000527720 LMO1P25800 156 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 CD200P41217 278 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 PEA15Q15121 130 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 IGFBP7Q16270 282 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 HSD17B11Q8NBQ5 300 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 RNF115Q9Y4L5 304 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 KPTNQ9Y664 436 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 CACNA1HO95180 2353 aa12.98□□□□□ -0.33
USH1C-207ENST00000527720 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 AGPAT2O15120 278 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 IGLV2-14P01704 120 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 PRH1P02810 166 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 HEXAP06865 529 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 KITLGP21583 273 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 MPV17P39210 176 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 ID4P47928 161 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 ZNF616Q08AN1 781 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 BCL2L14Q9BZR8 327 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 SH3BGRL3Q9H299 93 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 CXXC4Q9H2H0 198 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 LIN7CQ9NUP9 197 aaKnown RBP12.97□□□□□ -0.33
USH1C-207ENST00000527720 K7N7A8 449 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 HAND1O96004 215 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 GRPP07492 148 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 PSG2P11465 335 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 CTRB1P17538 263 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 ACSF3Q4G176 576 aaPredicted RBP12.97□□□□□ -0.33
USH1C-207ENST00000527720 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 OR51H1Q8NH63 302 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 MAGT1Q9H0U3 335 aa12.97□□□□□ -0.33
USH1C-207ENST00000527720 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.33
USH1C-207ENST00000527720 C3orf80F5H4A9 247 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 H0YL77 283 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 CHST1O43916 411 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 NPBWR1P48145 328 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 GPR146Q96CH1 333 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 GNPNAT1Q96EK6 184 aaPredicted RBP12.96□□□□□ -0.33
USH1C-207ENST00000527720 RAB40CQ96S21 281 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 ZNF318Q5VUA4 2279 aa12.96□□□□□ -0.33
USH1C-207ENST00000527720 INTS1Q8N201 2190 aaKnown RBP12.96□□□□□ -0.33
USH1C-207ENST00000527720 A0A1B0GW64 132 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 TMEM30CPA0ZSE6 113 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 MLNRO43193 412 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 WDR1O75083 606 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 IGLV1-44P01699 117 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 CLINT1Q14677 625 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 GUK1Q16774 197 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 KDF1Q8NAX2 398 aaPredicted RBP12.96□□□□□ -0.34
USH1C-207ENST00000527720 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 PRR7Q8TB68 274 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 SCRT1Q9BWW7 348 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 PARP12Q9H0J9 701 aaKnown RBP12.96□□□□□ -0.34
USH1C-207ENST00000527720 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 TINAGQ9UJW2 476 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 URB1O60287 2271 aaKnown RBP12.96□□□□□ -0.34
USH1C-207ENST00000527720 KIAA2026Q5HYC2 2103 aa12.96□□□□□ -0.34
USH1C-207ENST00000527720 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 TMEM50AO95807 157 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 ATP6V0CP27449 155 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 EIF2S3P41091 472 aaKnown RBP12.95□□□□□ -0.34
USH1C-207ENST00000527720 RPL23AP62750 156 aaKnown RBP12.95□□□□□ -0.34
USH1C-207ENST00000527720 P2RY6Q15077 328 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 SLC35E4Q6ICL7 350 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 TMEM182Q6ZP80 229 aaPredicted RBP12.95□□□□□ -0.34
USH1C-207ENST00000527720 ODF3L1Q8IXM7 274 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 FAM169BQ8N8A8 192 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 TMEM171Q8WVE6 324 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 RBM7Q9Y580 266 aaKnown RBP12.95□□□□□ -0.34
USH1C-207ENST00000527720 A0A0G2JRQ6 117 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
USH1C-207ENST00000527720 C9JQL5 133 aa12.95□□□□□ -0.34
USH1C-207ENST00000527720 WISP2O76076 250 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms