RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SYT6Q5T7P8 510 aaPredicted RBP8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 AWAT2Q6E213 333 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 LINC00311Q8N616 119 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 OR4F17Q8NGA8 305 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 OR52M1Q8NGK5 317 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 OR10X1Q8NGY0 326 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 NEK7Q8TDX7 302 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 ST6GALNAC6Q969X2 333 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 Q96M66 194 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 OR4F4Q96R69 305 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 DCLRE1BQ9H816 532 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 PCDHB16Q9NRJ7 776 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 ETAA1Q9NY74 926 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 ERGIC3Q9Y282 383 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 MOB4Q9Y3A3 225 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 PEX16Q9Y5Y5 336 aa8.27□□□□□ -1.09
PRPF40B-204ENST00000527253 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 ZNF736B4DX44 427 aaPredicted RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 MCRIP1C9JLW8 97 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 M0QZK8 103 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 CCRL2O00421 344 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 CRTAPO75718 401 aaPredicted RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 SC5DO75845 299 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 GAPDHP04406 335 aaKnown RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 CD37P11049 281 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 TMEM11P17152 192 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 GABPB1Q06547 395 aaPredicted RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 HES1Q14469 280 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 OR10K2Q6IF99 312 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 MOB3BQ86TA1 216 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 OR8H3Q8N146 312 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 Q8N6K4 173 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 WFDC9Q8NEX5 89 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 OR10V1Q8NGI7 309 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 FAM46BQ96A09 425 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 MRPS24Q96EL2 167 aaKnown RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 EAF1Q96JC9 268 aaPredicted RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 NOL4LQ96MY1 436 aaPredicted RBP8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 TMED9Q9BVK6 235 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 KCNK15Q9H427 330 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 SPACA1Q9HBV2 294 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 PLSCR3Q9NRY6 295 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 TRAPPC2LQ9UL33 140 aa8.26□□□□□ -1.09
PRPF40B-204ENST00000527253 FAM90A10PA6NDY2 464 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 H0YHG0 523 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 FGF16O43320 207 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 HBZP02008 142 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 VSIG8P0DPA2 414 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 FUT3P21217 361 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 SLC35A2P78381 396 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 SPHARQ15513 63 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 C1orf100Q5SVJ3 147 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 Q6ZPA2 131 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 SLC25A48Q6ZT89 311 aaKnown RBP8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 CEACAM19Q7Z692 300 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 ZNF329Q86UD4 541 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 NKAIN3Q8N8D7 197 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 OR52L2PQ8NGH6 319 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 MRPL30Q8TCC3 161 aaKnown RBP8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 RTN4IP1Q8WWV3 396 aaPredicted RBP8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 GFI1Q99684 422 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 UQCC2Q9BRT2 126 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 MND1Q9BWT6 205 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 DUSP21Q9H596 190 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 LINC00527Q9UJ94 153 aa8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 TSSC4Q9Y5U2 329 aaPredicted RBP8.25□□□□□ -1.09
PRPF40B-204ENST00000527253 PDCD6O75340 191 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 MPIG6BO95866 241 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 GLAP06280 429 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 IGLL1P15814 213 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 SRMP19623 302 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 MAPK3P27361 379 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 QRFPP83859 136 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 UNC119Q13432 240 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 GPR50Q13585 617 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 GNMTQ14749 295 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 Q3ZCU0 254 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 TMEM91Q6ZNR0 172 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 IZUMO1Q8IYV9 350 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 MS4A15Q8N5U1 240 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 Q8N9W7 124 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 PHYHIPQ92561 330 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 TMEM203Q969S6 136 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 PHF21AQ96BD5 680 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 SULT4A1Q9BR01 284 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 NICN1Q9BSH3 213 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 VCXQ9H320 206 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 TAF9BQ9HBM6 251 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 GHRLQ9UBU3 117 aa8.24□□□□□ -1.09
PRPF40B-204ENST00000527253 A0A0A6YYD4 124 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 PSMB11A5LHX3 300 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms