RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 ABHD14BQ96IU4 210 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 GPHA2Q96T91 129 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 PIGMQ9H3S5 423 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 OR14J1Q9UGF5 321 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 ZDHHC8Q9ULC8 765 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 SPEF1Q9Y4P9 236 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 ARID1AO14497 2285 aa13.4□□□□□ -0.26
USH1C-204ENST00000526313 APC2O95996 2303 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 IGLV3-9A0A075B6K5 115 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 A6NLC8 198 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 M0R1B8 84 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 CRYZL1O95825 349 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 SCGB1D2O95969 90 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 CRYAAP02489 173 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 VDAC1P21796 283 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 TMEM33P57088 247 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 RPL7L1Q6DKI1 246 aaKnown RBP13.39□□□□□ -0.27
USH1C-204ENST00000526313 IL1F10Q8WWZ1 152 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 SPIN2AQ99865 258 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 SPIN2BQ9BPZ2 258 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 SESN1Q9Y6P5 492 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 BSNQ9UPA5 3926 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 KRBOX1C9JBD0 128 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 S100GP29377 79 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 SMIM21Q3B7S5 101 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 RNF141Q8WVD5 230 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 COQ2Q96H96 371 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 ARV1Q9H2C2 271 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 UFSP2Q9NUQ7 469 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 FBXL17Q9UF56 701 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 ZNF835Q9Y2P0 537 aa13.39□□□□□ -0.27
USH1C-204ENST00000526313 RCL1Q9Y2P8 373 aaKnown RBP13.39□□□□□ -0.27
USH1C-204ENST00000526313 PIGBOS1A0A0B4J2F0 54 aa13.38□□□□□ -0.27
USH1C-204ENST00000526313 GPR137BO60478 399 aa13.38□□□□□ -0.27
USH1C-204ENST00000526313 JTBO76095 146 aa13.38□□□□□ -0.27
USH1C-204ENST00000526313 OR3A1P47881 315 aa13.38□□□□□ -0.27
USH1C-204ENST00000526313 FAM27E3Q08E93 113 aa13.38□□□□□ -0.27
USH1C-204ENST00000526313 TMED6Q8WW62 240 aa13.38□□□□□ -0.27
USH1C-204ENST00000526313 A0A0G2JNJ9 132 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 PRRG2O14669 202 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 HOXA4Q00056 320 aaPredicted RBP13.37□□□□□ -0.27
USH1C-204ENST00000526313 C22orf34Q6ZV56 151 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 MRGPRGQ86SM5 289 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 FAM90A1Q86YD7 464 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 CISD2Q8N5K1 135 aaKnown RBP13.37□□□□□ -0.27
USH1C-204ENST00000526313 UBAC2Q8NBM4 344 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 Q9UFV3 132 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 OOEPA6NGQ2 149 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 ZSCAN5BA6NJL1 495 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 SRRM5B3KS81 715 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 TEX46H3BTG2 121 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 TNFSF12O43508 249 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 ID3Q02535 119 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 FAM209AQ5JX71 171 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 LRRC29Q8WV35 223 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 ERGIC1Q969X5 290 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 OR2S2Q9NQN1 319 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 ZC4H2Q9NQZ6 224 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 KCNIP1Q9NZI2 227 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 DUSP13Q9UII6 198 aa13.37□□□□□ -0.27
USH1C-204ENST00000526313 C12orf77C9JDV5 145 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 ADAM20O43506 726 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 SLC25A6P12236 298 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 CEACAM6P40199 344 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 NKX2-1P43699 371 aaPredicted RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 COL10A1Q03692 680 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 TUSC1Q2TAM9 212 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 EIF5AL1Q6IS14 154 aaKnown RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 CD177Q8N6Q3 437 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 GALNT11Q8NCW6 608 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 OR1S2Q8NGQ3 325 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 SUN5Q8TC36 379 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 BSCL2Q96G97 398 aaPredicted RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 PARP12Q9H0J9 701 aaKnown RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 METRNQ9UJH8 293 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 MSRB2Q9Y3D2 182 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 CHD3Q12873 2000 aaKnown RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 RAB19A4D1S5 217 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 LGALS8O00214 317 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 PITX3O75364 302 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 AESQ08117 197 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 MARC2Q969Z3 335 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 SAT2Q96F10 170 aaPredicted RBP13.36□□□□□ -0.27
USH1C-204ENST00000526313 ELOVL5Q9NYP7 299 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 JKAMPQ9P055 326 aa13.36□□□□□ -0.27
USH1C-204ENST00000526313 ACACAQ13085 2346 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 CADP27708 2225 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 HSPA12AO43301 675 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 ZNF737O75373 536 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 LHBP01229 141 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 MMP9P14780 707 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 EGR1P18146 543 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 BMP5P22003 454 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 CCKARP32238 428 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 GNMTQ14749 295 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms