RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 CACNA1SQ13698 1873 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 IGLV4-3A0A075B6K6 122 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TRAV36DV7A0A075B6V5 113 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TCRBV9S1A1TA0A576 114 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 COLCA2A8K830 154 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZNF850A8MQ14 1090 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 IDSB3KWA1 339 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 RPL36A-HNRNPH2H7BZ11 118 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 K7ERI5 159 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 AIPO00170 330 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 GABRPO00591 440 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 PDCD5O14737 125 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 SYNGR1O43759 233 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 KBTBD11O94819 623 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 NXPH4O95158 308 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 HBE1P02100 147 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 SHBGP04278 402 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CSN2P05814 226 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CT45A6P0DMU7 189 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CT45A5P0DMU8 189 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CT45A7P0DMV0 189 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 PSG2P11465 335 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CD59P13987 128 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CXCL2P19875 107 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CSRP1P21291 193 aaKnown RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 USF1P22415 310 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 NPY1RP25929 384 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 BLVRBP30043 206 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 AGTR1P30556 359 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 SRIP30626 198 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 OPRD1P41143 372 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 GPR6P46095 362 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 AKR1C2P52895 323 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 EMP1P54849 157 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 RAB38P57729 211 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 BTG1P62324 171 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 RPS25P62851 125 aaKnown RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 DEFA5Q01523 94 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 PSG7Q13046 419 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 GPR50Q13585 617 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZNF146Q15072 292 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 SIX1Q15475 284 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 LRRC26Q2I0M4 334 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CT45A1Q5HYN5 189 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 GLYATL3Q5SZD4 288 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 C1orf194Q5T5A4 169 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 FAM27D1Q5T7N8 215 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 KDM4DQ6B0I6 523 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 HBMQ6B0K9 141 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 GLIPR1L1Q6UWM5 242 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TOMM20LQ6UXN7 152 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 Q6ZSR6 202 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 PRSS41Q7RTY9 318 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 NEGR1Q7Z3B1 354 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CMC1Q7Z7K0 106 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CBLN2Q8IUK8 224 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TCTE3Q8IZS6 198 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 VKORC1L1Q8N0U8 176 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CA13Q8N1Q1 262 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 EXOC3-AS1Q8N2X6 119 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 RYBPQ8N488 228 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 SPICQ8N5J4 248 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZNF433Q8N7K0 673 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 TCTEX1D1Q8N7M0 179 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZFP41Q8N8Y5 198 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 FER1L6-AS1Q8NA97 138 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 SUMF1Q8NBK3 374 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 OR10AD1Q8NGE0 317 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 OR8D4Q8NGM9 314 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 OR2K2Q8NGT1 345 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 OR6K6Q8NGW6 343 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 OR1S1Q8NH92 325 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZNRF2Q8NHG8 242 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CT45A3Q8NHU0 189 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TYMSOSQ8TAI1 123 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZNF502Q8TBZ5 544 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 FBXO25Q8TCJ0 367 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 BLNKQ8WV28 456 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TFB1MQ8WVM0 346 aaKnown RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 ASB13Q8WXK3 278 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 SLC7A6Q92536 515 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TSACCQ96A04 125 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 FGGYQ96C11 551 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 ZMYND19Q96E35 227 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 C1orf147Q96MC9 270 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 MS4A4EQ96PG1 132 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 CLCC1Q96S66 551 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TBX15Q96SF7 602 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 FOXC2Q99958 501 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 NRIP2Q9BQI9 281 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 HSPB9Q9BQS6 159 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 RTBDNQ9BSG5 229 aaPredicted RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 DOHHQ9BU89 302 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 APOOQ9BUR5 198 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TMEM59Q9BXS4 323 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TMEM126AQ9H061 195 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TMEM222Q9H0R3 208 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 FBXL15Q9H469 300 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 RNF121Q9H920 327 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 NHEJ1Q9H9Q4 299 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms