RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 SCOCQ9UIL1 159 aa13.41□□□□□ -0.26
TSKU-202ENST00000525167 GMPPBQ9Y5P6 360 aa13.41□□□□□ -0.26
TSKU-202ENST00000525167 ZNF93P35789 620 aaPredicted RBP13.4□□□□□ -0.26
TSKU-202ENST00000525167 SOX2P48431 317 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.26
TSKU-202ENST00000525167 STEAP3Q658P3 488 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 RPL22L1Q6P5R6 122 aaKnown RBP13.4□□□□□ -0.26
TSKU-202ENST00000525167 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 MYOZ3Q8TDC0 251 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 RGP1Q92546 391 aaPredicted RBP13.4□□□□□ -0.26
TSKU-202ENST00000525167 TMEM106AQ96A25 262 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 ZNF581Q9P0T4 197 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 ING4Q9UNL4 249 aa13.4□□□□□ -0.26
TSKU-202ENST00000525167 ZNF256Q9Y2P7 627 aaPredicted RBP13.4□□□□□ -0.26
TSKU-202ENST00000525167 RPL36Q9Y3U8 105 aaKnown RBP13.4□□□□□ -0.26
TSKU-202ENST00000525167 AIPO00170 330 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 SPINT2O43291 252 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 MT-ND4P03905 459 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 GTF2F2P13984 249 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 BDKRB2P30411 391 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 GPR176Q14439 515 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 ATAD3CQ5T2N8 411 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 DDI2Q5TDH0 399 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 UBE2E2Q96LR5 201 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 KCTD7Q96MP8 289 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 HSPB9Q9BQS6 159 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 AASSQ9UDR5 926 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 STAB2Q8WWQ8 2551 aa13.39□□□□□ -0.27
TSKU-202ENST00000525167 OR8U8P0C7N1 319 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 SERPINA2P20848 420 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 RUNX1Q01196 453 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 ZNF260Q3ZCT1 412 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 C6orf183Q5T699 404 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 ZFP1Q6P2D0 407 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 TRAT1Q6PIZ9 186 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 CBR4Q8N4T8 237 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 ZNF439Q8NDP4 499 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 OR11H1Q8NG94 326 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 NEK7Q8TDX7 302 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 MRPS24Q96EL2 167 aaKnown RBP13.38□□□□□ -0.27
TSKU-202ENST00000525167 AMBNQ9NP70 447 aa13.38□□□□□ -0.27
TSKU-202ENST00000525167 RCC2Q9P258 522 aaKnown RBP13.38□□□□□ -0.27
TSKU-202ENST00000525167 ZNF107Q9UII5 783 aaPredicted RBP13.38□□□□□ -0.27
TSKU-202ENST00000525167 IGHV3-43A0A0B4J1X8 118 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 ZNF736B4DX44 427 aaPredicted RBP13.37□□□□□ -0.27
TSKU-202ENST00000525167 C12orf77C9JDV5 145 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 LANCL1O43813 399 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 LIMS3P0CW19 117 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 IGHV3-43DP0DP04 118 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 VHLP40337 213 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 GTF2A1P52655 376 aaPredicted RBP13.37□□□□□ -0.27
TSKU-202ENST00000525167 GAPTQ8N292 157 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 CCDC107Q8WV48 283 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 GNG12Q9UBI6 72 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 SMAD5-AS1Q9Y6J3 95 aa13.37□□□□□ -0.27
TSKU-202ENST00000525167 MCRIP1C9JLW8 97 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 SLC31A2O15432 143 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 CA11O75493 328 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 PPIFP30405 207 aaKnown RBP13.36□□□□□ -0.27
TSKU-202ENST00000525167 F2RL1P55085 397 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 LSAMPQ13449 338 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 RIPK1Q13546 671 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 TMEM65Q6PI78 240 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 TMPRSS11AQ6ZMR5 421 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 UBALD1Q8TB05 177 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 FGF20Q9NP95 211 aaPredicted RBP13.36□□□□□ -0.27
TSKU-202ENST00000525167 VSIG4Q9Y279 399 aa13.36□□□□□ -0.27
TSKU-202ENST00000525167 H3BNX3 289 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 I3L521 148 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 GPX5O75715 221 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 HBZP02008 142 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 IGFBP3P17936 291 aaPredicted RBP13.35□□□□□ -0.27
TSKU-202ENST00000525167 ZNF134P52741 427 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 ZNF616Q08AN1 781 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 MMDQ15546 238 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 SLC22A6Q4U2R8 563 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 SYT6Q5T7P8 510 aaPredicted RBP13.35□□□□□ -0.27
TSKU-202ENST00000525167 FAM53AQ6NSI3 398 aaPredicted RBP13.35□□□□□ -0.27
TSKU-202ENST00000525167 ZNF554Q86TJ5 538 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 ZNF491Q8N8L2 437 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 SMIM19Q96E16 107 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 ZNF184Q99676 751 aaPredicted RBP13.35□□□□□ -0.27
TSKU-202ENST00000525167 ASCL2Q99929 193 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 C9orf16Q9BUW7 83 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 ETAA1Q9NY74 926 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 FAM53CQ9NYF3 392 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 CKLFQ9UBR5 152 aa13.35□□□□□ -0.27
TSKU-202ENST00000525167 LOC100130705A0A1B0GUX0 176 aa13.34□□□□□ -0.27
TSKU-202ENST00000525167 FAM90A10PA6NDY2 464 aa13.34□□□□□ -0.27
TSKU-202ENST00000525167 FAM90A7PA6NKC0 464 aa13.34□□□□□ -0.27
TSKU-202ENST00000525167 FAM90A23PA8MXZ1 464 aa13.34□□□□□ -0.27
TSKU-202ENST00000525167 IGLV1-40P01703 118 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms