RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SLC25A6P12236 298 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 MAS1LP35410 378 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 RPS23P62266 143 aaKnown RBP9.42□□□□□ -0.9
HDAC9-228ENST00000524023 DCAF10Q5QP82 559 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 AKR1C8PQ5T2L2 129 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 OR2T2Q6IF00 324 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 MCEMP1Q8IX19 187 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF295-AS1Q8N0V1 137 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 GPR87Q9BY21 358 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 OR51I2Q9H344 312 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 UNKLQ9H9P5 680 aaKnown RBP9.42□□□□□ -0.9
HDAC9-228ENST00000524023 PRSS50Q9UI38 385 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 LIPGQ9Y5X9 500 aa9.42□□□□□ -0.9
HDAC9-228ENST00000524023 ARGFXA6NJG6 315 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 RHBDL1O75783 438 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 SCAF4O95104 1147 aaKnown RBP9.41□□□□□ -0.9
HDAC9-228ENST00000524023 SERPINE2P07093 398 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 WNT2P09544 360 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF883P0CG24 379 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 CBR1P16152 277 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 CA6P23280 308 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 TAS2R30P59541 319 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 S100A12P80511 92 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 CLN3Q13286 438 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 ICAM4Q14773 271 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 HAGHQ16775 308 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 ADAM5Q6NVV9 412 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 Q6P435 159 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 STX12Q86Y82 276 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 OR10V1Q8NGI7 309 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 HIPK2Q9H2X6 1198 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 PIGBOS1A0A0B4J2F0 54 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 C21orf140B9A014 251 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 H3BQ15 152 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 J3QT63 122 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 DEGS1O15121 323 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 TXNL1O43396 289 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 DFFBO76075 338 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 OR2C1O95371 312 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 IL18BPO95998 194 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 S100A8P05109 93 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
HDAC9-228ENST00000524023 TLE4Q04727 773 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 IGFBP7Q16270 282 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF506Q5JVG8 444 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 RBMS3Q6XE24 437 aaKnown RBP9.41□□□□□ -0.9
HDAC9-228ENST00000524023 Q6ZRM9 215 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 OR1K1Q8NGR3 316 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 C12orf49Q9H741 205 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 OR1A1Q9P1Q5 309 aa9.41□□□□□ -0.9
HDAC9-228ENST00000524023 METTL1Q9UBP6 276 aaKnown RBP9.41□□□□□ -0.9
HDAC9-228ENST00000524023 H3BP45 60 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 IGKV1-39P01597 117 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 IGHV2-5P01817 119 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 IGKV1D-39P04432 117 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 HSPB1P04792 205 aaKnown RBP9.4□□□□□ -0.9
HDAC9-228ENST00000524023 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-228ENST00000524023 MEOX1P50221 254 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 IZUMO4Q1ZYL8 232 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 SPATA46Q5T0L3 261 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 MDP1Q86V88 176 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 BCL2L2Q92843 193 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-228ENST00000524023 RAB39BQ96DA2 213 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 RBMXL1Q96E39 390 aaKnown RBP9.4□□□□□ -0.9
HDAC9-228ENST00000524023 RAB40CQ96S21 281 aa9.4□□□□□ -0.9
HDAC9-228ENST00000524023 TRAV39A0A0B4J263 110 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 LRP5LA4QPB2 252 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.4□□□□□ -0.91
HDAC9-228ENST00000524023 MT-CO3P00414 261 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 HBE1P02100 147 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 SP1P08047 785 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 FBP1P09467 338 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 SMIM6P0DI80 62 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 CEBPGP53567 150 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 OR2B8PP59922 312 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 B2MP61769 119 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 TMEM267Q0VDI3 215 aaPredicted RBP9.4□□□□□ -0.91
HDAC9-228ENST00000524023 TESK1Q15569 626 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 THNSL2Q86YJ6 484 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 C1QL4Q86Z23 238 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 CYB561D1Q8N8Q1 229 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 CLDND2Q8NHS1 167 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 RNASE11Q8TAA1 199 aaKnown RBP9.4□□□□□ -0.91
HDAC9-228ENST00000524023 LSM10Q969L4 123 aaKnown RBP9.4□□□□□ -0.91
HDAC9-228ENST00000524023 GUCD1Q96NT3 240 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.91
HDAC9-228ENST00000524023 GP6Q9HCN6 339 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 KNTC1P50748 2209 aa9.4□□□□□ -0.91
HDAC9-228ENST00000524023 TECTAO75443 2155 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 H0YL77 283 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 CNOT4O95628 575 aaKnown RBP9.39□□□□□ -0.91
HDAC9-228ENST00000524023 IFNA5P01569 189 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 MPLP40238 635 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 MDH2P40926 338 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms