RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 IZUMO2Q6UXV1 221 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 TMEM104Q8NE00 496 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 WIPF2Q8TF74 440 aaPredicted RBP13.8□□□□□ -0.2
CCNC-213ENST00000523541 SLC25A33Q9BSK2 321 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 BANF2Q9H503 90 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 GFOD1Q9NXC2 390 aa13.8□□□□□ -0.2
CCNC-213ENST00000523541 WNK1Q9H4A3 2382 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 ERICH4A6NGS2 130 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 CCRL2O00421 344 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 SDCBPO00560 298 aaPredicted RBP13.79□□□□□ -0.2
CCNC-213ENST00000523541 SLC22A1O15245 554 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 MRPS14O60783 128 aaKnown RBP13.79□□□□□ -0.2
CCNC-213ENST00000523541 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
CCNC-213ENST00000523541 CD24P25063 80 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 IL3RAP26951 378 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 HTR2CP28335 458 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 LOXL3P58215 753 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 ZNF816Q0VGE8 651 aaPredicted RBP13.79□□□□□ -0.2
CCNC-213ENST00000523541 C1QL4Q86Z23 238 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 OR6M1Q8NGM8 313 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 MGLLQ99685 303 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 CCDC90BQ9GZT6 254 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 ACOT13Q9NPJ3 140 aa13.79□□□□□ -0.2
CCNC-213ENST00000523541 MBNL3Q9NUK0 354 aaKnown RBP13.79□□□□□ -0.2
CCNC-213ENST00000523541 LPLP06858 475 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 HSMCR30P0CW71 290 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 RPS27AP62979 156 aaKnown RBP13.78□□□□□ -0.2
CCNC-213ENST00000523541 INSL4Q14641 139 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 PDLIM3Q53GG5 364 aaPredicted RBP13.78□□□□□ -0.2
CCNC-213ENST00000523541 SIGIRRQ6IA17 410 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 CCDC107Q8WV48 283 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 SGCDQ92629 289 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 NEDD4LQ96PU5 975 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 TM2D1Q9BX74 207 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 KCNIP1Q9NZI2 227 aa13.78□□□□□ -0.2
CCNC-213ENST00000523541 TRAV39A0A0B4J263 110 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 C12orf77C9JDV5 145 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 TXNL1O43396 289 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 IGHV3-7P01780 117 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 VSIG8P0DPA2 414 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 EBI3Q14213 229 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 TBCEQ15813 527 aaPredicted RBP13.77□□□□□ -0.21
CCNC-213ENST00000523541 LY6G6FQ5SQ64 297 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 UTF1Q5T230 341 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 FAM27D1Q5T7N8 215 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 TMEM91Q6ZNR0 172 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 NDUFA11Q86Y39 141 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 LEAP2Q969E1 77 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 TMEM59Q9BXS4 323 aa13.77□□□□□ -0.21
CCNC-213ENST00000523541 A0A1W2PPI3 338 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 TMEM14DPA8MWL7 114 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 FGF16O43320 207 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 MPIG6BO95866 241 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 CD28P10747 220 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 VHLP40337 213 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 GNG10P50151 68 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 ZNF137PP52743 207 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 HTD2P86397 168 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 TMEM95Q3KNT9 176 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 SLC25A48Q6ZT89 311 aaKnown RBP13.76□□□□□ -0.21
CCNC-213ENST00000523541 OR2W3Q7Z3T1 314 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 TMEM203Q969S6 136 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 URM1Q9BTM9 101 aaKnown RBP13.76□□□□□ -0.21
CCNC-213ENST00000523541 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
CCNC-213ENST00000523541 MOB4Q9Y3A3 225 aa13.76□□□□□ -0.21
CCNC-213ENST00000523541 SLC17A2O00624 439 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 HSD17B6O14756 317 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 ATP6V1G2O95670 118 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 HBZP02008 142 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 AMY1AP04745 511 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 AMY2AP04746 511 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 SNRNP70P08621 437 aaKnown RBP13.75□□□□□ -0.21
CCNC-213ENST00000523541 ARSBP15848 533 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 CHATP28329 748 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 QRFPP83859 136 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 ABCA11PQ4W5N1 156 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 Q6ZS46 218 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 ZNF367Q7RTV3 350 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 CENPVQ7Z7K6 275 aaPredicted RBP13.75□□□□□ -0.21
CCNC-213ENST00000523541 DRAM1Q8N682 238 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 OR4K15Q8NH41 348 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 FAM46BQ96A09 425 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 YTHDF1Q9BYJ9 559 aaKnown RBP13.75□□□□□ -0.21
CCNC-213ENST00000523541 Q9H521 79 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 TAF9BQ9HBM6 251 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 GNG12Q9UBI6 72 aa13.75□□□□□ -0.21
CCNC-213ENST00000523541 IGHV1-3A0A0C4DH29 117 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 UBE2QL1A1L167 161 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 RGS11O94810 467 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 OPN1MWP04001 364 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 OPN1MW2P0DN77 364 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 OPN1MW3P0DN78 364 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 TMEM11P17152 192 aa13.74□□□□□ -0.21
CCNC-213ENST00000523541 RCC1P18754 421 aaPredicted RBP13.74□□□□□ -0.21
CCNC-213ENST00000523541 GALP22466 123 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms