RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 OR5H8P0DN80 308 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 SERPINA2P20848 420 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 GALEQ14376 348 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 PRR18Q8N4B5 295 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 METTL9Q9H1A3 318 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 GNG12Q9UBI6 72 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 VSIG4Q9Y279 399 aa20.15■□□□□ 0.82
PVT1-219ENST00000523427 EXOGQ9Y2C4 368 aaKnown RBP20.15■□□□□ 0.82
PVT1-219ENST00000523427 IGF1P05019 195 aa20.14■□□□□ 0.81
PVT1-219ENST00000523427 RBM11P57052 281 aaKnown RBP20.14■□□□□ 0.81
PVT1-219ENST00000523427 GABPB1Q06547 395 aaPredicted RBP20.14■□□□□ 0.81
PVT1-219ENST00000523427 C1orf146Q5VVC0 180 aa20.14■□□□□ 0.81
PVT1-219ENST00000523427 ZNF491Q8N8L2 437 aa20.14■□□□□ 0.81
PVT1-219ENST00000523427 CENPNQ96H22 339 aaPredicted RBP20.14■□□□□ 0.81
PVT1-219ENST00000523427 UBE2E2Q96LR5 201 aa20.14■□□□□ 0.81
PVT1-219ENST00000523427 PARP11Q9NR21 331 aa20.14■□□□□ 0.81
PVT1-219ENST00000523427 I3L521 148 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 AIPO00170 330 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 OVOL1O14753 267 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 SPNP16150 400 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 KIAA0141Q14154 515 aaPredicted RBP20.13■□□□□ 0.81
PVT1-219ENST00000523427 MMDQ15546 238 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 MEDAGQ5VYS4 303 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 ASCL4Q6XD76 172 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 ZNF429Q86V71 674 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 C8orf31Q8N9H6 132 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 S100A13Q99584 98 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 ALX4Q9H161 411 aaPredicted RBP20.13■□□□□ 0.81
PVT1-219ENST00000523427 ZMAT4Q9H898 229 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 AMBNQ9NP70 447 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 DNAH7Q8WXX0 4024 aa20.13■□□□□ 0.81
PVT1-219ENST00000523427 SNTNA6NMZ2 147 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 ORC5O43913 435 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 MT-ND4P03905 459 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 ZNF134P52741 427 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 GBX2P52951 348 aaPredicted RBP20.12■□□□□ 0.81
PVT1-219ENST00000523427 SNRPGP62308 76 aaKnown RBP20.12■□□□□ 0.81
PVT1-219ENST00000523427 SLC25A48Q6ZT89 311 aaKnown RBP20.12■□□□□ 0.81
PVT1-219ENST00000523427 SYS1Q8N2H4 156 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 MYOZ3Q8TDC0 251 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 JAM3Q9BX67 310 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 TRAPPC2LQ9UL33 140 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 ORC6Q9Y5N6 252 aa20.12■□□□□ 0.81
PVT1-219ENST00000523427 SACSQ9NZJ4 4579 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 LCE6AA0A183 80 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 A0A1W2PP11 408 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 ATP6V0E1O15342 81 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 VHLP40337 213 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 GTF2A1P52655 376 aaPredicted RBP20.11■□□□□ 0.81
PVT1-219ENST00000523427 SLURP1P55000 103 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 CT45A1Q5HYN5 189 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 ZNF529Q6P280 563 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 STX19Q8N4C7 294 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 OR4K15Q8NH41 348 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 CT45A3Q8NHU0 189 aa20.11■□□□□ 0.81
PVT1-219ENST00000523427 EPPK1P58107 5090 aaKnown RBP20.1■□□□□ 0.81
PVT1-219ENST00000523427 TRIM64CA6NLI5 447 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 C12orf77C9JDV5 145 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 TXNL1O43396 289 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 GP9P14770 177 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 PPIFP30405 207 aaKnown RBP20.1■□□□□ 0.81
PVT1-219ENST00000523427 SRSF7Q16629 238 aaKnown RBP eCLIP20.1■□□□□ 0.813e-10■■■■■ 33.8
PVT1-219ENST00000523427 SLC22A6Q4U2R8 563 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 SLC25A30Q5SVS4 291 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 DDI2Q5TDH0 399 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 ZNF497Q6ZNH5 498 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 ZNF439Q8NDP4 499 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 OR1L1Q8NH94 360 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 RGP1Q92546 391 aaPredicted RBP20.1■□□□□ 0.81
PVT1-219ENST00000523427 DLX4Q92988 240 aaPredicted RBP20.1■□□□□ 0.81
PVT1-219ENST00000523427 MYCBPQ99417 103 aaPredicted RBP20.1■□□□□ 0.81
PVT1-219ENST00000523427 IFT22Q9H7X7 185 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 ERVK13-1Q9NX77 482 aa20.1■□□□□ 0.81
PVT1-219ENST00000523427 SPINT2O43291 252 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 CNTFRP26992 372 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 ZNF93P35789 620 aaPredicted RBP20.09■□□□□ 0.81
PVT1-219ENST00000523427 RAB9AP51151 201 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 DOC2BQ14184 412 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 SYT6Q5T7P8 510 aaPredicted RBP20.09■□□□□ 0.81
PVT1-219ENST00000523427 CASTOR1Q8WTX7 329 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 ORAI1Q96D31 301 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 RITA1Q96K30 269 aa20.09■□□□□ 0.81
PVT1-219ENST00000523427 TRAV41A0A0B4J266 112 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 CD2P06729 351 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 ACTBP60709 375 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 PPP3R1P63098 170 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 RUNX1Q01196 453 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 LSAMPQ13449 338 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 NHLRC3Q5JS37 347 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 OR51J1Q9H342 316 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 IL36GQ9NZH8 169 aa20.08■□□□□ 0.81
PVT1-219ENST00000523427 FADS2O95864 444 aaKnown RBP20.07■□□□□ 0.8
PVT1-219ENST00000523427 HBZP02008 142 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 MPV17LQ2QL34 196 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 GPR148Q8TDV2 347 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 ARPC1AQ92747 370 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 TMEM106AQ96A25 262 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 ZNF251Q9BRH9 671 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 ANKRD60Q9BZ19 345 aa20.07■□□□□ 0.8
PVT1-219ENST00000523427 TMEM138Q9NPI0 162 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms