RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OR51D1Q8NGF3 324 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 OR6N2Q8NGY6 317 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 OR2G2Q8NGZ5 317 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 THEM6Q8WUY1 208 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 SLC25A46Q96AG3 418 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 KCTD7Q96MP8 289 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 AMELYQ99218 206 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 TSC22D3Q99576 134 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 CHCHD6Q9BRQ6 235 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 QTRT1Q9BXR0 403 aaKnown RBP5.18□□□□□ -1.58
SDCBP-210ENST00000522843 HDHD2Q9H0R4 259 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 TLNRD1Q9H1K6 362 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 DCSTAMPQ9H295 470 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF222Q9UK12 451 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 PITPNC1Q9UKF7 332 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF256Q9Y2P7 627 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-210ENST00000522843 DNAH17Q9UFH2 4485 aa5.18□□□□□ -1.58
SDCBP-210ENST00000522843 IGKV1D-17A0A075B6S4 117 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 TRBV5-7A0A0A0MS05 114 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 TRBV2A0A0J9YWF9 115 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 GABRPO00591 440 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 CDIPTO14735 213 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 TNFRSF6BO95407 300 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 IGLV3-1P01715 115 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 HLA-DQA2P01906 255 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 APOC1P02654 83 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ACAA1P09110 424 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 CFL1P23528 166 aaKnown RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 CD24P25063 80 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ETV6P41212 452 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 SERPINB10P48595 397 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 RORCP51449 518 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 DLX6P56179 175 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 RPS25P62851 125 aaKnown RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 EIF2B1Q14232 305 aaKnown RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF273Q14593 569 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ABCA11PQ4W5N1 156 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 CEP78Q5JTW2 689 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 GLYATL3Q5SZD4 288 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 TMEM244Q5VVB8 128 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 MORN5Q5VZ52 161 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 PRSS45Q7RTY3 260 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 MRPL21Q7Z2W9 205 aaKnown RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 FAM220AQ7Z4H9 259 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 DCXRQ7Z4W1 244 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ELMOD2Q8IZ81 293 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 OSR2Q8N2R0 312 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 PRSS35Q8N3Z0 413 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 YIPF7Q8N8F6 280 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ZNRF1Q8ND25 227 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 OR56B2PQ8NGI1 322 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 OR6Q1Q8NGQ2 317 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 OR2AJ1Q8NGZ0 328 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 NDNFQ8TB73 568 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 GATAD1Q8WUU5 269 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 SLAMF6Q96DU3 332 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 MALSU1Q96EH3 234 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 HIST1H2AAQ96QV6 131 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 TBX5Q99593 518 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 FGF23Q9GZV9 251 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 DNTTIP1Q9H147 329 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 HEXA-AS1Q9H8Q6 139 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 ABCB10Q9NRK6 738 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
SDCBP-210ENST00000522843 GNG8Q9UK08 70 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 R4GMQ9 66 aa5.17□□□□□ -1.58
SDCBP-210ENST00000522843 DNAH6Q9C0G6 4158 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 GGT3PA6NGU5 568 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 SEC14L6B5MCN3 397 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF878C9JN71 531 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 PSMD9O00233 223 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 MAGEB4O15481 346 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 ARL6IP5O75915 188 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 HCKP08631 526 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 SPARCP09486 303 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 SRMP19623 302 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 CCL1P22362 96 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 MAPK3P27361 379 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 SOX6P35712 828 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 PSMD7P51665 324 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 GRB2P62993 217 aaKnown RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 DEFB136Q30KP8 78 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 ZNF829Q3KNS6 432 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 Q499Y3 187 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 C9orf66Q5T8R8 295 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 CEACAM19Q7Z692 300 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 LINC00346Q8IVM7 164 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 CDH26Q8IXH8 852 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 KLHL30-AS1Q8NEE0 82 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 OR5AK2Q8NH90 309 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 GPR148Q8TDV2 347 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 ACOT12Q8WYK0 555 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 TMEM203Q969S6 136 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 MED30Q96HR3 178 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 CMTM3Q96MX0 182 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 PPIL3Q9H2H8 161 aaKnown RBP5.16□□□□□ -1.58
SDCBP-210ENST00000522843 RERGLQ9H628 205 aa5.16□□□□□ -1.58
SDCBP-210ENST00000522843 MOB1AQ9H8S9 216 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms