RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 MUCL1Q96DR8 90 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 C18orf12Q96KH6 178 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 IL17FQ96PD4 163 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ZNF607Q96SK3 696 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 GPR22Q99680 433 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 SIGMAR1Q99720 223 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 TMEM204Q9BSN7 226 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ALG12Q9BV10 488 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CHRNA10Q9GZZ6 450 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ATG5Q9H1Y0 275 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 MOB1AQ9H8S9 216 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ELL3Q9HB65 397 aaPredicted RBP4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR2S2Q9NQN1 319 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 CLN6Q9NWW5 311 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 BET1LQ9NYM9 111 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 MTCH1Q9NZJ7 389 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 MRPL15Q9P015 296 aaKnown RBP4.66□□□□□ -1.66
NUP54-218ENST00000515460 ABI3Q9P2A4 366 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 ZNF391Q9UJN7 358 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 TNFSF18Q9UNG2 199 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 LAMP3Q9UQV4 416 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 OR51B2Q9Y5P1 312 aa4.66□□□□□ -1.66
NUP54-218ENST00000515460 A0A096LPK6 155 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 A0A0J9YY10 115 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 TCRBV7S3A2A0A539 114 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 SMIM30A4D0T7 59 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FAM183AA6NL82 134 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FAM166BA8MTA8 275 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FAM220BPB1ANY3 271 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FAM157AC9JC47 383 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PDE6DO43924 150 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ENTPD6O75354 484 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 NME6O75414 186 aaPredicted RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 WISP2O76076 250 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 GPR75O95800 540 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 IGHG4P01861 327 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 APOC2P02655 101 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PPIAL4GP0DN37 164 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PGAM2P15259 253 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 CD1DP15813 335 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ZNF19P17023 458 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 MAOAP21397 527 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PSMB4P28070 264 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 GABRA5P31644 462 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 DAPP51397 102 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 GAS1P54826 345 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 UBE2KP61086 200 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 RPS23P62266 143 aaKnown RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 AIMP2Q13155 320 aaKnown RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 SLC36A2Q495M3 483 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ZNF585BQ52M93 769 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ZNF324BQ6AW86 544 aaPredicted RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 OR2T5Q6IEZ7 315 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 CD200R1LQ6Q8B3 271 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 DHRS11Q6UWP2 260 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FRRS1Q6ZNA5 592 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 COX15Q7KZN9 410 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ZNF546Q86UE3 836 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 BOD1L2Q8IYS8 172 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 CMTM1Q8IZ96 169 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PNKDQ8N490 385 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PAQR4Q8N4S7 273 aaPredicted RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 LINC01555Q8NAE3 123 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 OR4B1Q8NGF8 309 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 OR2T29Q8NH02 315 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 NEIL3Q8TAT5 605 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 SLC2A12Q8TD20 617 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 THEM6Q8WUY1 208 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 FAM46BQ96A09 425 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 MSI2Q96DH6 328 aaKnown RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 KTI12Q96EK9 354 aaPredicted RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 PYURFQ96I23 114 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ABHD1Q96SE0 405 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ATOH8Q96SQ7 321 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 ARHGDIGQ99819 225 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FOXC2Q99958 501 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 RHNO1Q9BSD3 238 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PSMG3Q9BT73 122 aaPredicted RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 FAIM2Q9BWQ8 316 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 AAMDCQ9H7C9 122 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 GEMIN7Q9H840 131 aaKnown RBP4.65□□□□□ -1.67
NUP54-218ENST00000515460 G6PC2Q9NQR9 355 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PARP11Q9NR21 331 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FKBP11Q9NYL4 201 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 TAS2R8Q9NYW2 309 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 AHSPQ9NZD4 102 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 COMMD9Q9P000 198 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 CLN8Q9UBY8 286 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 CRLS1Q9UJA2 301 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 JPT1Q9UK76 154 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FBXW2Q9UKT8 454 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 PLAGL1Q9UM63 463 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 FLVCR2Q9UPI3 526 aa4.65□□□□□ -1.67
NUP54-218ENST00000515460 MYO7BQ6PIF6 2116 aa4.64□□□□□ -1.67
NUP54-218ENST00000515460 TRBV2A0A0J9YWF9 115 aa4.64□□□□□ -1.67
NUP54-218ENST00000515460 A0A1B0GW64 132 aa4.64□□□□□ -1.67
NUP54-218ENST00000515460 IGSF23A1L1A6 192 aa4.64□□□□□ -1.67
NUP54-218ENST00000515460 OR6C6A6NF89 314 aa4.64□□□□□ -1.67
NUP54-218ENST00000515460 OR51F1A6NGY5 319 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms