RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TMEM56Q96MV1 263 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 SLC5A7Q9GZV3 580 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 SHARPINQ9H0F6 387 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 GCM1Q9NP62 436 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 ZFP57Q9NU63 452 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 KCNIP1Q9NZI2 227 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 OR14J1Q9UGF5 321 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 NDRG3Q9UGV2 375 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TRAPPC2LQ9UL33 140 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TMED3Q9Y3Q3 217 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 TMEM56-RWDD3S4R434 201 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 U3KQ87 197 aa7.02□□□□□ -1.29
RNF4-220ENST00000513578 RP1L1Q8IWN7 2480 aaPredicted RBP7.02□□□□□ -1.29
RNF4-220ENST00000513578 IGKV1D-17A0A075B6S4 117 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 C3orf85A0A1B0GTC6 90 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 C5orf51A6NDU8 294 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 TUBAL3A6NHL2 446 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 SHISA9B4DS77 424 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 BET1O15155 118 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ARPC5O15511 151 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 SPRY3O43610 288 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ADAP1O75689 374 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 OR4A8P0C604 315 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 OR5AC1P0C628 307 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 MUC1P15941 1255 aaPredicted RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 GZMHP20718 246 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 UCP1P25874 307 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 S100GP29377 79 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 LUMP51884 338 aaPredicted RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 HTD2P86397 168 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ATXN7L3Q14CW9 347 aaPredicted RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 TEX36Q5VZQ5 186 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ALKBH2Q6NS38 261 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 PRSS54Q6PEW0 395 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 VHLLQ6RSH7 139 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ACOT7LQ6ZUV0 252 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ZNF546Q86UE3 836 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 MOGAT3Q86VF5 341 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 DMRTC2Q8IXT2 367 aaPredicted RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 CMTM1Q8IZ96 169 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 KCNRGQ8N5I3 272 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 OR10V1Q8NGI7 309 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 OR5D13Q8NGL4 314 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 ANGPTL6Q8NI99 470 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 SEC22AQ96IW7 307 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 OR10C1Q96KK4 312 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 MFFQ9GZY8 342 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 TMEM222Q9H0R3 208 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 FAM234AQ9H0X4 552 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 DNTTIP1Q9H147 329 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 METTL8Q9H825 291 aaKnown RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 TAF9BQ9HBM6 251 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 DNAJB11Q9UBS4 358 aa7.01□□□□□ -1.29
RNF4-220ENST00000513578 FBXO9Q9UK97 447 aaPredicted RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 RAI1Q7Z5J4 1906 aaPredicted RBP7.01□□□□□ -1.29
RNF4-220ENST00000513578 C2CD3Q4AC94 2353 aa7□□□□□ -1.29
RNF4-220ENST00000513578 BSNQ9UPA5 3926 aa7□□□□□ -1.29
RNF4-220ENST00000513578 FXYD6-FXYD2A0A087WZ82 144 aa7□□□□□ -1.29
RNF4-220ENST00000513578 IGKV1D-13A0A0B4J2D9 117 aa7□□□□□ -1.29
RNF4-220ENST00000513578 C13orf42A0A1B0GVH6 325 aa7□□□□□ -1.29
RNF4-220ENST00000513578 CLEC18AA5D8T8 446 aa7□□□□□ -1.29
RNF4-220ENST00000513578 FAM25EA8MYX2 175 aa7□□□□□ -1.29
RNF4-220ENST00000513578 B9A039 149 aa7□□□□□ -1.29
RNF4-220ENST00000513578 C12orf77C9JDV5 145 aa7□□□□□ -1.29
RNF4-220ENST00000513578 H0Y980 276 aa7□□□□□ -1.29
RNF4-220ENST00000513578 K7N7A8 449 aa7□□□□□ -1.29
RNF4-220ENST00000513578 ATP6V1G1O75348 118 aa7□□□□□ -1.29
RNF4-220ENST00000513578 PGLYRP1O75594 196 aaPredicted RBP7□□□□□ -1.29
RNF4-220ENST00000513578 ZNF205O95201 554 aa7□□□□□ -1.29
RNF4-220ENST00000513578 CDS2O95674 445 aa7□□□□□ -1.29
RNF4-220ENST00000513578 IFNA7P01567 189 aa7□□□□□ -1.29
RNF4-220ENST00000513578 CD3EP07766 207 aa7□□□□□ -1.29
RNF4-220ENST00000513578 PET100P0DJ07 73 aa7□□□□□ -1.29
RNF4-220ENST00000513578 IGKV1-13P0DP09 117 aa7□□□□□ -1.29
RNF4-220ENST00000513578 APOBEC3AP31941 199 aaPredicted RBP7□□□□□ -1.29
RNF4-220ENST00000513578 CEBPDP49716 269 aaPredicted RBP7□□□□□ -1.29
RNF4-220ENST00000513578 AESQ08117 197 aa7□□□□□ -1.29
RNF4-220ENST00000513578 PHLDA2Q53GA4 152 aa7□□□□□ -1.29
RNF4-220ENST00000513578 SPRNQ5BIV9 151 aa7□□□□□ -1.29
RNF4-220ENST00000513578 BEX5Q5H9J7 111 aa7□□□□□ -1.29
RNF4-220ENST00000513578 KRBOX4Q5JUW0 171 aa7□□□□□ -1.29
RNF4-220ENST00000513578 GGNBP1Q5YKI7 109 aa7□□□□□ -1.29
RNF4-220ENST00000513578 STUMQ69YW2 141 aa7□□□□□ -1.29
RNF4-220ENST00000513578 ZNF818PQ6ZRF7 136 aa7□□□□□ -1.29
RNF4-220ENST00000513578 TBC1D26Q86UD7 250 aa7□□□□□ -1.29
RNF4-220ENST00000513578 SLC51BQ86UW2 128 aa7□□□□□ -1.29
RNF4-220ENST00000513578 ZNF561Q8N587 486 aa7□□□□□ -1.29
RNF4-220ENST00000513578 CLEC18CQ8NCF0 446 aa7□□□□□ -1.29
RNF4-220ENST00000513578 ZNF680Q8NEM1 530 aa7□□□□□ -1.29
RNF4-220ENST00000513578 GALMQ96C23 342 aa7□□□□□ -1.29
RNF4-220ENST00000513578 ABHD14BQ96IU4 210 aa7□□□□□ -1.29
RNF4-220ENST00000513578 TMEM204Q9BSN7 226 aa7□□□□□ -1.29
RNF4-220ENST00000513578 RNF126Q9BV68 326 aa7□□□□□ -1.29
RNF4-220ENST00000513578 EGLN1Q9GZT9 426 aa7□□□□□ -1.29
RNF4-220ENST00000513578 MS4A5Q9H3V2 200 aa7□□□□□ -1.29
RNF4-220ENST00000513578 RAB9BQ9NP90 201 aa7□□□□□ -1.29
RNF4-220ENST00000513578 CCL28Q9NRJ3 127 aa7□□□□□ -1.29
RNF4-220ENST00000513578 FAM212BQ9NTI7 297 aaPredicted RBP7□□□□□ -1.29
RNF4-220ENST00000513578 RDH8Q9NYR8 311 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms