RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 LOC390937A0A1W2PQ73 354 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 NGFRP08138 427 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 OR10J4P0C629 311 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 BOD1Q96IK1 185 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF665Q9H7R5 613 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 PATE3B3GLJ2 98 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 PAGE4O60829 102 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 RPS4Y1P22090 263 aaKnown RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 HERPUD1Q15011 391 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 WDR25Q64LD2 544 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-211ENST00000513346 PRR27Q6MZM9 219 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 OR5R1Q8NH85 324 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 RNF126Q9BV68 326 aa9.84□□□□□ -0.83
TCOF1-211ENST00000513346 CTXND1A0A1B0GTU2 59 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 M0R1X1 148 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 ISG15P05161 165 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF766Q5HY98 468 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 STPG1Q5TH74 334 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 ZDHHC23Q8IYP9 409 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 GINS3Q9BRX5 216 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 CRYM-AS1A6NIL9 109 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 LGALS4P56470 323 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM50BP56557 158 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 SGMS2Q8NHU3 365 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 NUDT16L1Q9BRJ7 211 aaKnown RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 CHST5Q9GZS9 411 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 OPN3Q9H1Y3 402 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 IGKV1-8A0A0C4DH67 115 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 DBX1A6NMT0 343 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 SIRPB1O00241 398 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 SFTPCP11686 197 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 CCL4P13236 92 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 GSX1Q9H4S2 264 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF391Q9UJN7 358 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 PCOLCE2Q9UKZ9 415 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 YTHDF2Q9Y5A9 579 aaKnown RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 PDE6DO43924 150 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 RPS16P62249 146 aaKnown RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 MEF2BQ02080 365 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF816Q0VGE8 651 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 GFRALQ6UXV0 394 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 GAPTQ8N292 157 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 CPEB3Q8NE35 698 aaKnown RBP9.83□□□□□ -0.84
TCOF1-211ENST00000513346 DEFB108BQ8NET1 73 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 OR1L6Q8NGR2 347 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 Q8WTZ3 238 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 TAAR6Q96RI8 345 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 FOXB1Q99853 325 aa9.83□□□□□ -0.84
TCOF1-211ENST00000513346 H3BMH7 237 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 M0R1B8 84 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 SH2D1BO14796 132 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 IGKV1D-16P01601 117 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 CD5P06127 495 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 MST1P26927 711 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 GNG4P50150 75 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF718Q3SXZ3 478 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF506Q5JVG8 444 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 WDR74Q6RFH5 385 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-211ENST00000513346 SCCPDHQ8NBX0 429 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 OCIAD1Q9NX40 245 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 CISD1Q9NZ45 108 aaKnown RBP9.82□□□□□ -0.84
TCOF1-211ENST00000513346 NOTCH2Q04721 2471 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 LOC285556D6RIA3 1793 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 BMP5P22003 454 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 PEBP1P30086 187 aaKnown RBP9.82□□□□□ -0.84
TCOF1-211ENST00000513346 FZD5Q13467 585 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 C19orf35Q6ZS72 473 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 C10orf35Q96D05 121 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 TIMD4Q96H15 378 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 HDHD3Q9BSH5 251 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF236Q9UL36 1845 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 SBF1O95248 1867 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 LOC102724200A0A096LPH7 203 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-211ENST00000513346 A0A1W2PP11 408 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 DHRS7CA6NNS2 312 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 SNURFLB1AK76 121 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 HRKO00198 91 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 BRS3P32247 399 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 RAB35Q15286 201 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 LSRQ86X29 649 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-211ENST00000513346 OR8G5Q8NG78 346 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 OR10V1Q8NGI7 309 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 OR2Y1Q8NGV0 311 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 RNF24Q9Y225 148 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 LCTP09848 1927 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF318Q5VUA4 2279 aa9.82□□□□□ -0.84
TCOF1-211ENST00000513346 A0A1B0GU03 582 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 IGHV4-34P06331 123 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 SRP19P09132 144 aaKnown RBP9.81□□□□□ -0.84
TCOF1-211ENST00000513346 SP9P0CG40 484 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 RAB7AP51149 207 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM211Q6ICI0 200 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HEPN1Q6WQI6 88 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 D2HGDHQ8N465 521 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 M0R2Z0 102 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms