RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TBX15Q96SF7 602 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 HDHD3Q9BSH5 251 aaPredicted RBP6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 PCGF1Q9BSM1 259 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 MIXL1Q9H2W2 232 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 GSX1Q9H4S2 264 aaPredicted RBP6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 LINC00574Q9H8X3 128 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 SIRT7Q9NRC8 400 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 KCNIP1Q9NZI2 227 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 RABL2AQ9UBK7 228 aaPredicted RBP6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 EXTL2Q9UBQ6 330 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 RABL2BQ9UNT1 228 aa6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 FN1P02751 2386 aaKnown RBP6.22□□□□□ -1.41
HMGXB3-204ENST00000513318 TRAV39A0A0B4J263 110 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 C12orf77C9JDV5 145 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 NPIPB11E5RHQ5 1161 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 C15orf65H3BRN8 121 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 SPINT2O43291 252 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 FCGR3AP08637 254 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 RCC1P18754 421 aaPredicted RBP6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 PRTN3P24158 256 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 KIR2DS4P43632 304 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 KIR2DS1Q14954 304 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 HMGN3Q15651 99 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 SRSF7Q16629 238 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 FAM120AOSQ5T036 256 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 GPR157Q5UAW9 335 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 OR52W1Q6IF63 320 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 CNIH2Q6PI25 160 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 Q6ZPA2 131 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 IZUMO1Q8IYV9 350 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 C11orf42Q8N5U0 333 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 NANPQ8TBE9 248 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 SETD6Q8TBK2 473 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 C15orf40Q8WUR7 153 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 NUDCD2Q8WVJ2 157 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 ARL11Q969Q4 196 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 DIRAS2Q96HU8 199 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 KIRREL1Q96J84 757 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 AUNIPQ9H7T9 357 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 TAF9BQ9HBM6 251 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 ZNF286AQ9HBT8 521 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 Q9N2K0 584 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 IDI2-AS1Q9NZ38 188 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 CDC42EP3Q9UKI2 254 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 SESN1Q9Y6P5 492 aa6.21□□□□□ -1.42
HMGXB3-204ENST00000513318 TEP1Q99973 2627 aaKnown RBP6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 A0A087X0M5 115 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 A0A1B0GX30 115 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 F2RL2O00254 374 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 SULT1C2O00338 296 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 FSHBP01225 129 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 HLA-DQB1P01920 261 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 HBZP02008 142 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 LPLP06858 475 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 OMGP23515 440 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 FPR2P25090 351 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 CD34P28906 385 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 TNFSF8P32971 234 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 PRSS3P35030 304 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 CBX5P45973 191 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 BPIFB3P59826 476 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 CNPY1Q3B7I2 92 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 PRAMEF5Q5TYX0 476 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 ZNF782Q6ZMW2 699 aaPredicted RBP6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 Q6ZS49 121 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 Q71RC1 249 aaPredicted RBP6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 PRR18Q8N4B5 295 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 DTX3Q8N9I9 347 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 OR52M1Q8NGK5 317 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 OR13D1Q8NGV5 346 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 WFDC12Q8WWY7 111 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 TNFRSF14Q92956 283 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 LHX4Q969G2 390 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 GALMQ96C23 342 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 TMEM133Q9H2Q1 129 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 HEXA-AS1Q9H8Q6 139 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 SCPEP1Q9HB40 452 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 PTTG2Q9NZH5 202 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 JPT1Q9UK76 154 aa6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 ELF5Q9UKW6 265 aaPredicted RBP6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 MRPS7Q9Y2R9 242 aaKnown RBP6.2□□□□□ -1.42
HMGXB3-204ENST00000513318 IGHV2-26A0A0B4J1V2 119 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 CENPVL3A0A0U1RRI6 287 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 TRDCB7Z8K6 153 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 INAFM1C9JVW0 142 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 RNASEK-C17orf49H0YIS7 233 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 SDCBPO00560 298 aaPredicted RBP6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 FABP7O15540 132 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 SSX5O60225 188 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 MMP23AO75900 390 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 DIRAS3O95661 229 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 IGHV4-38-2P0DP08 117 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 PTHLHP12272 177 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 NFYBP25208 207 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 SRP14P37108 136 aaKnown RBP6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 GDNFP39905 211 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 UBE2E1P51965 193 aa6.19□□□□□ -1.42
HMGXB3-204ENST00000513318 DLX1P56177 255 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms