RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 IGKV1D-33P01593 117 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 IGKV1-33P01594 117 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 IGHG2P01859 326 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 CSTBP04080 98 aaKnown RBP5.67□□□□□ -1.5
USP46-208ENST00000512656 HOXD3P31249 432 aaPredicted RBP5.67□□□□□ -1.5
USP46-208ENST00000512656 GNG10P50151 68 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 KRTAP10-11P60412 298 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 PPP3R1P63098 170 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 ZNF816Q0VGE8 651 aaPredicted RBP5.67□□□□□ -1.5
USP46-208ENST00000512656 HNF4GQ14541 408 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 ZSCAN26Q16670 478 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 LTC4SQ16873 150 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 CCDC58Q4VC31 144 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 NHLRC3Q5JS37 347 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 RSBN1Q5VWQ0 802 aaPredicted RBP5.67□□□□□ -1.5
USP46-208ENST00000512656 LPCAT4Q643R3 524 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 ASCL4Q6XD76 172 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 RNF144BQ7Z419 303 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 MOB3BQ86TA1 216 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 LINC00596Q86U02 117 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 ZNF329Q86UD4 541 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 ZNF695Q8IW36 515 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 STX19Q8N4C7 294 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 C8orf31Q8N9H6 132 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 KLHL30-AS1Q8NEE0 82 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 Q8NFD4 153 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 OR52M1Q8NGK5 317 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 OR2T10Q8NGZ9 312 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 RHOXF1Q8NHV9 184 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 RFESDQ8TAC1 157 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 MRGPRDQ8TDS7 321 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 GPR148Q8TDV2 347 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 PYDC1Q8WXC3 89 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 B9D2Q9BPU9 175 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 PDCD1LG2Q9BQ51 273 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 DPCDQ9BVM2 203 aaPredicted RBP5.67□□□□□ -1.5
USP46-208ENST00000512656 FAM192AQ9GZU8 254 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 METTL9Q9H1A3 318 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 ISG20L2Q9H9L3 353 aaKnown RBP5.67□□□□□ -1.5
USP46-208ENST00000512656 ST3GAL6Q9Y274 331 aa5.67□□□□□ -1.5
USP46-208ENST00000512656 IGHV1-3A0A0C4DH29 117 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 NCBP2LA6PVI3 153 aaKnown RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 GABRPO00591 440 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 HSD17B6O14756 317 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 RRP9O43818 475 aaKnown RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 ORC5O43913 435 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 RAMP3O60896 148 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 OR7C1O76099 320 aaPredicted RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 IGHV3-7P01780 117 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 SSTR5P35346 364 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 SOX2P48431 317 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 RBM11P57052 281 aaKnown RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 DGCR2P98153 550 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 FOXE3Q13461 319 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 EBI3Q14213 229 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 GPR176Q14439 515 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 PNLIPRP3Q17RR3 467 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 MPV17LQ2QL34 196 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 PIGYQ3MUY2 71 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 Q3ZCU0 254 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 CXorf66Q5JRM2 361 aaPredicted RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 ZNF529Q6P280 563 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 RPL22L1Q6P5R6 122 aaKnown RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 TMPRSS11AQ6ZMR5 421 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 TGIF2LXQ8IUE1 241 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 IZUMO1Q8IYV9 350 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 STPG2Q8N412 459 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 CBR4Q8N4T8 237 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 LINC00311Q8N616 119 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 SUMF2Q8NBJ7 301 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 OR8H1Q8NGG4 311 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 OR51A2Q8NGJ7 313 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 OR10K1Q8NGX5 313 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 OR52N1Q8NH53 320 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 PLPPR1Q8TBJ4 325 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 NEK7Q8TDX7 302 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 LEAP2Q969E1 77 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 ARL11Q969Q4 196 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 TMEM106AQ96A25 262 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 NOL4LQ96MY1 436 aaPredicted RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 RASL11BQ9BPW5 248 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 C9orf16Q9BUW7 83 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 SPACA1Q9HBV2 294 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 AMBNQ9NP70 447 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 TMEM138Q9NPI0 162 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 LIN7CQ9NUP9 197 aaKnown RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 MRPS18AQ9NVS2 196 aaKnown RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 IL36GQ9NZH8 169 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 CKLFQ9UBR5 152 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 ING4Q9UNL4 249 aa5.66□□□□□ -1.5
USP46-208ENST00000512656 SIRT4Q9Y6E7 314 aaPredicted RBP5.66□□□□□ -1.5
USP46-208ENST00000512656 LOC100130705A0A1B0GUX0 176 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 IRGMA1A4Y4 181 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 E9PI62 339 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 H0YHG0 523 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 CCL24O00175 119 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 SDCBPO00560 298 aaPredicted RBP5.65□□□□□ -1.5
USP46-208ENST00000512656 SPINT2O43291 252 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms