RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 LIPGQ9Y5X9 500 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.6
PCDHA4-202ENST00000512229 CD74P04233 296 aa11.27□□□□□ -0.6
PCDHA4-202ENST00000512229 PLAURQ03405 335 aa11.27□□□□□ -0.6
PCDHA4-202ENST00000512229 OVCH2Q7RTZ1 564 aa11.27□□□□□ -0.6
PCDHA4-202ENST00000512229 OR10Z1Q8NGY1 313 aa11.27□□□□□ -0.6
PCDHA4-202ENST00000512229 Q9N2K0 584 aa11.27□□□□□ -0.6
PCDHA4-202ENST00000512229 HEATR1Q9H583 2144 aaKnown RBP11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 ZNF727A8MUV8 499 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 OR5G3P0C626 314 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 GNB2P62879 340 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 COL10A1Q03692 680 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 PJVKQ0ZLH3 352 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 ZIC4Q8N9L1 334 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 ITLN1Q8WWA0 313 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 C19orf12Q9NSK7 152 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 CADP27708 2225 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 P2RY1P47900 373 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 S100A12P80511 92 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 MIDNQ504T8 468 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 IL34Q6ZMJ4 242 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 ETV3LQ6ZN32 361 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 COMMD1Q8N668 190 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 POM121Q96HA1 1249 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 SLC35D1Q9NTN3 355 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 ONECUT1Q9UBC0 465 aa11.27□□□□□ -0.61
PCDHA4-202ENST00000512229 PPP1CCP36873 323 aaKnown RBP11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 TAS2R45P59539 299 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 IL24Q13007 206 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 C9orf152Q5JTZ5 239 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 ADAM5Q6NVV9 412 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 C1QTNF5Q9BXJ0 243 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 MELTFP08582 738 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 SLC25A6P12236 298 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 KIR2DS2P43631 304 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 PRRX1P54821 245 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 TMEM65Q6PI78 240 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 CLEC9AQ6UXN8 241 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 BCL2L2Q92843 193 aaPredicted RBP11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 ABHD17AQ96GS6 310 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 NUP210Q8TEM1 1887 aaPredicted RBP11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 GBF1Q92538 1859 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 PPIAL4EA0A075B759 164 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 PPIAL4DF5H284 164 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 OR7C2O60412 319 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 YIF1AO95070 293 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 PPIAL4FP0DN26 164 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 COX7A1P24310 79 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 H3F3AP84243 136 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 SOSTQ9BQB4 213 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 SLC2A8Q9NY64 477 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 ZNF319Q9P2F9 582 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 PPIAL4AQ9Y536 164 aa11.26□□□□□ -0.61
PCDHA4-202ENST00000512229 LY6G6EA0A0G2JKS1 128 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 RNASEK-C17orf49H0YIS7 233 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 CD200P41217 278 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 Q0VFX4 171 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 OR4F5Q8NH21 305 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 OR4F4Q96R69 305 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 URGCP-MRPS24S4R325 110 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 U3KQA8 63 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 MPV17P39210 176 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 GUK1Q16774 197 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 TIMM23BQ5SRD1 257 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 UQCC3Q6UW78 93 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 C14orf79Q96F83 325 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 TNFSF18Q9UNG2 199 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 FAM96BQ9Y3D0 163 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 SLC25A4P12235 298 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 CMTM2Q8TAZ6 248 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 C5orf66Q9H5L9 145 aa11.25□□□□□ -0.61
PCDHA4-202ENST00000512229 WNK2Q9Y3S1 2297 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 A0A1B0GU03 582 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 HBZP02008 142 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 FGF2P09038 288 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 PSG2P11465 335 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 P2RY4P51582 365 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 TMEM50BP56557 158 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 GGNQ86UU5 652 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms