RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 LYRM2Q9NU23 88 aaPredicted RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 CST2P09228 141 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 APOBEC3DQ96AK3 386 aaPredicted RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 ZDHHC8Q9ULC8 765 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 DVL1O14640 695 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 GATCO43716 136 aaKnown RBP12.83□□□□□ -0.36
USP38-202ENST00000510377 SYNGR1O43759 233 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 CRYAAP02489 173 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 OPN1MWP04001 364 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 OPN1MW2P0DN77 364 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 OPN1MW3P0DN78 364 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 FAM78BQ5VT40 261 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 SPINK14Q6IE38 97 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 GPR35Q9HC97 309 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 DMRT1Q9Y5R6 373 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 SPINK4O60575 86 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 COX5AP20674 150 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 CFPP27918 469 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
USP38-202ENST00000510377 GALNT14Q96FL9 552 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 C1orf147Q96MC9 270 aaPredicted RBP12.83□□□□□ -0.36
USP38-202ENST00000510377 ANGPTL4Q9BY76 406 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 V9GYS6 101 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 KIAA1549LQ6ZVL6 1849 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 TICRRQ7Z2Z1 1910 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 IGHV3-43A0A0B4J1X8 118 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 PMS2P1A4D2B8 440 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 IGHV3-43DP0DP04 118 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 AGAP20933 346 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 ANOS1P23352 680 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 MDH2P40926 338 aaKnown RBP12.83□□□□□ -0.36
USP38-202ENST00000510377 DHRS13Q6UX07 377 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 MSL2Q9HCI7 577 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 SIRT7Q9NRC8 400 aa12.83□□□□□ -0.36
USP38-202ENST00000510377 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 HSPB1P04792 205 aaKnown RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 CXCL1P09341 107 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 SLC25A6P12236 298 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 F2RP25116 425 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 HIKESHIQ53FT3 197 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 DCAF12Q5T6F0 453 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 CARFQ8N187 725 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 OR10G4Q8NGN3 311 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 OR10G9Q8NGN4 311 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 OR10G7Q8NGN6 311 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 VAX2Q9UIW0 290 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 ZNF17P17021 662 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 KITLGP21583 273 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 ZNF600Q6ZNG1 722 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 NFAM1Q8NET5 270 aaPredicted RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 IL22RA2Q969J5 263 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 FAM103A1Q9BTL3 118 aaKnown RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 RRP8O43159 456 aaKnown RBP12.82□□□□□ -0.36
USP38-202ENST00000510377 PAX6P26367 422 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 GNG3P63215 75 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 TUSC5Q8IXB3 177 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 TREM2Q9NZC2 230 aa12.82□□□□□ -0.36
USP38-202ENST00000510377 HOXA5P20719 270 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 SUCLG1P53597 346 aaKnown RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 PNRC1Q12796 327 aaPredicted RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 PRAMEF5Q5TYX0 476 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 PRAMEF6Q5VXH4 476 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 FAM131CQ96AQ9 280 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 TMEM204Q9BSN7 226 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 IGKV1-12A0A0C4DH73 117 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 A0A1W2PQM1 296 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 TGOLN2O43493 480 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 PAGE4O60829 102 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 IGKV1D-12P01611 117 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 DDTP30046 118 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 RIMS4Q9H426 269 aaPredicted RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 FER1L5A0AVI2 2057 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 SLC22A20A6NK97 555 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 K7N7A8 449 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 RPS2P15880 293 aaKnown RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 EPHA8P29322 1005 aaPredicted RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 SRD5A2P31213 254 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 ZNF90Q03938 601 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 ZNF468Q5VIY5 522 aaPredicted RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 MSI2Q96DH6 328 aaKnown RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 PCGF1Q9BSM1 259 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 RTL8AQ9BWD3 113 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 ZDHHC11Q9H8X9 412 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 IGKV1D-13A0A0B4J2D9 117 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 PGLYRP1O75594 196 aaPredicted RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 IGKV1-13P0DP09 117 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 GLIPR1P48060 266 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms