RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 GUCA2AQ02747 115 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 TAF9Q16594 264 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 CDNFQ49AH0 187 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 FAM58AQ8N1B3 248 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 OR5T2Q8NGG2 359 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 CYYR1Q96J86 154 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 ZNF488Q96MN9 340 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 C7orf50Q9BRJ6 194 aaKnown RBP11.94□□□□□ -0.5
HMGCL-208ENST00000509389 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 KLK11Q9UBX7 282 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 ELF5Q9UKW6 265 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-208ENST00000509389 H3BUI4 141 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 NDUFB3O43676 98 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 GLAP06280 429 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 PROK1P58294 105 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 ACTBP60709 375 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 GMFBP60983 142 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 IKZF1Q13422 519 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 ATPAF1Q5TC12 328 aaPredicted RBP11.93□□□□□ -0.5
HMGCL-208ENST00000509389 STUMQ69YW2 141 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 Q6P435 159 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 DMRTB1Q96MA1 342 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 DCTN5Q9BTE1 182 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 C11orf54Q9H0W9 315 aaPredicted RBP11.93□□□□□ -0.5
HMGCL-208ENST00000509389 DPAGT1Q9H3H5 408 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 SPACA1Q9HBV2 294 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 SIRT7Q9NRC8 400 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 TAS2R8Q9NYW2 309 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
HMGCL-208ENST00000509389 RNASEK-C17orf49H0YIS7 233 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 M0QZ24 198 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 TIMM23O14925 209 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 GPR37O15354 613 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 CD74P04233 296 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 SELLP14151 372 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 FUT3P21217 361 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 GABRR1P24046 479 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 RCVRNP35243 200 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 PRB3Q04118 309 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-208ENST00000509389 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 Q6ZNX1 250 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 Q8N7P7 452 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 POC5Q8NA72 575 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 C8orf46Q8TAG6 207 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 NUDCD2Q8WVJ2 157 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 EMG1Q92979 244 aaKnown RBP11.92□□□□□ -0.5
HMGCL-208ENST00000509389 SULT4A1Q9BR01 284 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 OCSTAMPQ9BR26 566 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 WDR13Q9H1Z4 485 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 RASL12Q9NYN1 266 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 DNAJB11Q9UBS4 358 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 A0A1W2PRD5 423 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 A0A1W2PRF3 423 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 A0A1W2PRM7 423 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 LYRM1O43325 122 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 RBBP9O75884 186 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 TFF1P04155 84 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 FBP1P09467 338 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 PRKACAP17612 351 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 LMO1P25800 156 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 DLX1P56177 255 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 AP3S2P59780 193 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 ZNF788Q6ZQV5 615 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 Q6ZSV7 163 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 GDPD3Q7L5L3 318 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 GAPTQ8N292 157 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 CENPSQ8N2Z9 138 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 TOMM5Q8N4H5 51 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 TMEM229BQ8NBD8 167 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 CHST4Q8NCG5 386 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 H1FXQ92522 213 aaKnown RBP11.92□□□□□ -0.5
HMGCL-208ENST00000509389 DNTTIP1Q9H147 329 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 ZNRD1Q9P1U0 126 aa11.92□□□□□ -0.5
HMGCL-208ENST00000509389 TRAV24A0A0B4J272 114 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 VGLL3A8MV65 326 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 NPFFO15130 113 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 OR7C1O76099 320 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-208ENST00000509389 NXPH2O95156 264 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 CSF1P09603 554 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 GSTT2BP0CG30 244 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 TBPP20226 339 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 DTYMKP23919 212 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 SLC6A1P30531 599 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 CBX5P45973 191 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 GNG2P59768 71 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 PAX5Q02548 391 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 KLRD1Q13241 179 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 RNASE12Q5GAN4 147 aaKnown RBP11.91□□□□□ -0.5
HMGCL-208ENST00000509389 Q6ZS49 121 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 NRARPQ7Z6K4 114 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 DUSP18Q8NEJ0 188 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 SNAPC3Q92966 411 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms