RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OR10K2Q6IF99 312 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 CEACAM19Q7Z692 300 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 C5orf24Q7Z6I8 188 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 LYPD6Q86Y78 171 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 THRSPQ92748 146 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 TMEM203Q969S6 136 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 RBMXL1Q96E39 390 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 Q96M66 194 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 CCDC90BQ9GZT6 254 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 GFOD1Q9NXC2 390 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 MOB4Q9Y3A3 225 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 H0YHG0 523 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 SLC31A2O15432 143 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 ORC5O43913 435 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 PRB2P02812 416 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 LOXL3P58215 753 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 SIGIRRQ6IA17 410 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 SLC16A12Q6ZSM3 486 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 LRRTM1Q86UE6 522 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 CDH26Q8IXH8 852 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 MS4A15Q8N5U1 240 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 UFD1Q92890 307 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 UQCC2Q9BRT2 126 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 GNG12Q9UBI6 72 aa11.78□□□□□ -0.52
UBE2D3-228ENST00000508974 IGHV1-3A0A0C4DH29 117 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A18PA6NE21 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A16PA6NEW6 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A20PA6NIJ5 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A9PA6NNJ1 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A12PA8MX19 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A5PA8MXJ8 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 LCE2BO14633 110 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 SPINT2O43291 252 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 HBZP02008 142 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 GAPDHP04406 335 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A15PP0C7V4 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A13PP0C7W8 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A14PP0C7W9 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A24PP0C7X0 464 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 FUT3P21217 361 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 MYF6P23409 242 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 SLC35A2P78381 396 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 EMX1Q04741 257 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 HSD17B12Q53GQ0 312 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 TCTEX1D4Q5JR98 221 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 C6orf183Q5T699 404 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 RNLSQ5VYX0 342 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 GLT8D1Q68CQ7 371 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 UNQ9370/PRO34162Q6UXP9 181 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 IZUMO2Q6UXV1 221 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 OR8H3Q8N146 312 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 OR4F17Q8NGA8 305 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 OR4F4Q96R69 305 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 CST11Q9H112 138 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 LINC00527Q9UJ94 153 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 TPRKBQ9Y3C4 175 aa11.77□□□□□ -0.53
UBE2D3-228ENST00000508974 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 M0QZK8 103 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 RGS10O43665 173 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 PDCD6O75340 191 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 MAP2K4P45985 399 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 RPS25P62851 125 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 ZNF816Q0VGE8 651 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 IRF3Q14653 427 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 GNMTQ14749 295 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 C5orf56Q8N8D9 126 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 OR4X2Q8NGF9 303 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 OR52M1Q8NGK5 317 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 CNBD2Q96M20 576 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 NICN1Q9BSH3 213 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 ANKRD60Q9BZ19 345 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 PF4V1P10720 104 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 SRMP19623 302 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 IL3RAP26951 378 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 CD83Q01151 205 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 P2RY14Q15391 338 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 C6orf201Q7Z4U5 140 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 OR52L2PQ8NGH6 319 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 MRPL30Q8TCC3 161 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 RTN4IP1Q8WWV3 396 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 PHYHIPQ92561 330 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 SULT4A1Q9BR01 284 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 TMEM59Q9BXS4 323 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 GHRLQ9UBU3 117 aa11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 PRKDCP78527 4128 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-228ENST00000508974 PSMB11A5LHX3 300 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms