RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 BEST4Q8NFU0 473 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR51E1Q8TCB6 317 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 WDR13Q9H1Z4 485 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TAS2R5Q9NYW4 299 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GDF2Q9UK05 429 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 TMED3Q9Y3Q3 217 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 HILPDAQ9Y5L2 63 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 FREM1Q5H8C1 2179 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 HIVEP3Q5T1R4 2406 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LOC102723996A0A087X1L8 192 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LOC102723971A0A1B0GUV8 181 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TMEM262E9PQX1 116 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 G3V2L1 256 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PLPP3O14495 311 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CDIPTO14735 213 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 WNT9BO14905 357 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 AGPAT2O15120 278 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MPDU1O75352 247 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 NEURL1O76050 574 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CRYGBP07316 175 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TPT1P13693 172 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 DUSP1P28562 367 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LHX2P50458 406 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 UCP2P55851 309 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 UBE2MP61081 183 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 ALKBH1Q13686 389 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 C5orf64Q2M2E5 130 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 C2orf68Q2NKX9 166 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ANKRD55Q3KP44 614 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CD164L2Q6UWJ8 174 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 DGAT2L6Q6ZPD8 337 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR10V1Q8NGI7 309 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MRAPQ8TCY5 172 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ADTRPQ96IZ2 230 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PFDN5Q99471 154 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF436Q9C0F3 470 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 NPFFR1Q9GZQ6 430 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CTDSP1Q9GZU7 261 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 EXOSC3Q9NQT5 275 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 CA10Q9NS85 328 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MEX3AA1L020 520 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF815PA8K554 130 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GABRPO00591 440 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PSCAO43653 123 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MBP02144 154 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MMP7P09237 267 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF85Q03923 595 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PEA15Q15121 130 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF141Q15928 474 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 RPEL1Q2QD12 228 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CNPY1Q3B7I2 92 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TMEM41BQ5BJD5 291 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 SLC35D3Q5M8T2 416 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF774Q6NX45 483 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 Q6ZSR9 355 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR2L13Q8N349 312 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 STPG3Q8N7X2 389 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TMEM52Q8NDY8 209 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR4B1Q8NGF8 309 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GTF3AQ92664 365 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF486Q96H40 463 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 IMMP1LQ96LU5 166 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR2V2Q96R30 315 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 DPCDQ9BVM2 203 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 WDR61Q9GZS3 305 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 MMP27Q9H306 513 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZMAT4Q9H898 229 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR1A1Q9P1Q5 309 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LOC105371267A0A1B0GV96 52 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 I3L521 148 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 NKX2-1P43699 371 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 PAX5Q02548 391 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF816Q0VGE8 651 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 C3orf36Q3SXR2 165 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 NCR3LG1Q68D85 454 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF770Q6IQ21 691 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 PRR27Q6MZM9 219 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ZNF343Q6P1L6 599 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 Q6ZT83 130 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR10K1Q8NGX5 313 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 HARBI1Q96MB7 349 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 TXNIPQ9H3M7 391 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 MED20Q9H944 212 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 SLC7A10Q9NS82 523 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 FAM212BQ9NTI7 297 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 TRAPPC4Q9Y296 219 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CHCHD2Q9Y6H1 151 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 A0A087WUJ7 227 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 OR2T8A6NH00 312 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 ATP6V1G2-DDX39BF2Z307 99 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 KLF7O75840 302 aaPredicted RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 CDK1P06493 297 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 HIST1H1EP10412 219 aaKnown RBP2.55□□□□□ -2
NEDD4-208ENST00000508342 ADRA2CP18825 462 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 NPY1RP25929 384 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 DCTDP32321 178 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CD200P41217 278 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 BLOC1S1P78537 153 aa2.55□□□□□ -2
NEDD4-208ENST00000508342 CYS1Q717R9 158 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms