RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PRDM14Q9GZV8 571 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR51I2Q9H344 312 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 WDR54Q9H977 334 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 CHODLQ9H9P2 273 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 SLC39A9Q9NUM3 307 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 LIN7CQ9NUP9 197 aaKnown RBP4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 CRIM1Q9NZV1 1036 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 PRSS50Q9UI38 385 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 MRPS17Q9Y2R5 130 aaKnown RBP4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 HS3ST3B1Q9Y662 390 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 CHCHD2Q9Y6H1 151 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 ATP23Q9Y6H3 246 aa4.26□□□□□ -1.73
HMGB3P16-201ENST00000508037 DNAH12Q6ZR08 3092 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ATG2BQ96BY7 2078 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 LOC102723996A0A087X1L8 192 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGKV1-12A0A0C4DH73 117 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 MED19A0JLT2 244 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 FAM221AA4D161 298 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 C5orf63A6NC05 138 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 MAP1LC3B2A6NCE7 125 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 CEBPZOSA8MTT3 80 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 A8MWP6 167 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 NPIPB11E5RHQ5 1161 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 M0QZK8 103 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 SYNGR2O43760 224 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 GGCTO75223 188 aaKnown RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF737O75373 536 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PGLYRP1O75594 196 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 HRASP01112 189 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGKV1D-12P01611 117 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 OPN1LWP04000 364 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 RD3LP0DJH9 198 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 COX5BP10606 129 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 CD99P14209 185 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF32P17041 273 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 SRD5A2P31213 254 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 HOXA6P31267 233 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 GALR1P47211 349 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PDLIM4P50479 330 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ASCL1P50553 236 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 IDH3GP51553 393 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 MEF2BQ02080 365 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 CFHR1Q03591 330 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PRDX4Q13162 271 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 MSMO1Q15800 293 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 LRRC75BQ2VPJ9 315 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 BSXQ3C1V8 233 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PHYHD1Q5SRE7 291 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF774Q6NX45 483 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF818PQ6ZRF7 136 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 P4HA3Q7Z4N8 544 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZDHHC23Q8IYP9 409 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 CISD2Q8N5K1 135 aaKnown RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR2AE1Q8NHA4 323 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR10J5Q8NHC4 309 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PLPPR1Q8TBJ4 325 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ABHD5Q8WTS1 349 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 CA5BP1Q8WTZ4 195 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM170AQ8WVE7 144 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 LHX4Q969G2 390 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 SNX22Q96L94 193 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 JSRP1Q96MG2 331 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF385AQ96PM9 386 aaKnown RBP4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 FANCD2OSQ96PS1 177 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PSMG3-AS1Q96PY0 264 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 IMMP2LQ96T52 175 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 FOXB1Q99853 325 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 TXNDC17Q9BRA2 123 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 ABHD14AQ9BUJ0 271 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 DUSP23Q9BVJ7 150 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 C1QTNF5Q9BXJ0 243 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 STRADBQ9C0K7 418 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 MAP1LC3BQ9GZQ8 125 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 RPRMQ9NS64 109 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PPP1R14DQ9NXH3 145 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PSENENQ9NZ42 101 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 TAAR3PQ9P1P4 343 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR2W1Q9Y3N9 320 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 RNF115Q9Y4L5 304 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 THADAQ6YHU6 1953 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 EXPH5Q8NEV8 1989 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 F5P12259 2224 aa4.25□□□□□ -1.73
HMGB3P16-201ENST00000508037 PCNTO95613 3336 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TRAV9-1A0A075B6T8 112 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CTXND1A0A1B0GTU2 59 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 A0A1B0GV90 55 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CCDC85CA6NKD9 419 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR5B21A6NL26 309 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 SHISA7A6NL88 538 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 C17orf112F2Z3M2 114 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 M0R143 59 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TNFSF11O14788 317 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PHOX2AO14813 284 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TCAPO15273 167 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGHEP01854 428 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 AMBPP02760 352 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TYMSP04818 313 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 SERPINA7P05543 415 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms