RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CCDC71LQ8N9Z2 235 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 ISOC2Q96AB3 205 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 TAAR6Q96RI8 345 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 EGLN1Q9GZT9 426 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 RPS10P5Q9NQ39 176 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 POMT1Q9Y6A1 747 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 MUC6Q6W4X9 2439 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 A0A1B0GV50 99 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM24AA6NFZ4 105 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 GLAP06280 429 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 UCP2P55851 309 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 SNRPEP62304 92 aaKnown RBP12.29□□□□□ -0.44
DDX41-208ENST00000507955 IL24Q13007 206 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
DDX41-208ENST00000507955 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 OR5B21A6NL26 309 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 GPR137BO60478 399 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 OR2H2O95918 312 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 LMO1P25800 156 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 MEOX2P50222 304 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 GUK1Q16774 197 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 Q6P435 159 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 SELENOHQ8IZQ5 122 aaKnown RBP12.28□□□□□ -0.44
DDX41-208ENST00000507955 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 SNRNP70P08621 437 aaKnown RBP12.28□□□□□ -0.44
DDX41-208ENST00000507955 ACAA1P09110 424 aaPredicted RBP12.28□□□□□ -0.44
DDX41-208ENST00000507955 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 FOLR2P14207 255 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 PMELP40967 661 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 P2RY1P47900 373 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 CLINT1Q14677 625 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 OR4D5Q8NGN0 318 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 KLF14Q8TD94 323 aaPredicted RBP12.28□□□□□ -0.44
DDX41-208ENST00000507955 SPACA1Q9HBV2 294 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 FBXO9Q9UK97 447 aaPredicted RBP12.28□□□□□ -0.44
DDX41-208ENST00000507955 KPTNQ9Y664 436 aa12.28□□□□□ -0.44
DDX41-208ENST00000507955 A0A0G2JRQ6 117 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 SSSCA1O60232 199 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 TUSC2O75896 110 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 IGHG3P01860 377 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 CBR1P16152 277 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 EPHA1P21709 976 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 FABP6P51161 128 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 TGFBR3Q03167 851 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 Q6ZT83 130 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 OPN3Q9H1Y3 402 aaPredicted RBP12.27□□□□□ -0.44
DDX41-208ENST00000507955 MSL2Q9HCI7 577 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 OBP2BQ9NPH6 170 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.44
DDX41-208ENST00000507955 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 A6NLC8 198 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 J3QT63 122 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 PGLYRP1O75594 196 aaPredicted RBP12.27□□□□□ -0.45
DDX41-208ENST00000507955 NXPH2O95156 264 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 PPP1CCP36873 323 aaKnown RBP12.27□□□□□ -0.45
DDX41-208ENST00000507955 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 KIR2DS1Q14954 304 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 RBMS3Q6XE24 437 aaKnown RBP12.27□□□□□ -0.45
DDX41-208ENST00000507955 RPRMLQ8N4K4 120 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 C15orf54Q8N8G6 183 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 OR10J5Q8NHC4 309 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 OPA3Q9H6K4 179 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 C19orf12Q9NSK7 152 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 TMED3Q9Y3Q3 217 aa12.27□□□□□ -0.45
DDX41-208ENST00000507955 A0A1W2PPH5 198 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 MLNRO43193 412 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 TMEM50AO95807 157 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 PAX6P26367 422 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 CAMLGP49069 296 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 ZNF324BQ6AW86 544 aaPredicted RBP12.26□□□□□ -0.45
DDX41-208ENST00000507955 Q6ZS49 121 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 RTL8AQ9BWD3 113 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 EIF5A2Q9GZV4 153 aaKnown RBP12.26□□□□□ -0.45
DDX41-208ENST00000507955 PTAFRP25105 342 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 PRAMEF6Q5VXH4 476 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 TMEM217Q8N7C4 229 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 ZNF610Q8N9Z0 462 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 WDR31Q8NA23 367 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 C11orf1Q9H5F2 150 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 PPP1R3CQ9UQK1 317 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
DDX41-208ENST00000507955 PSPNO60542 156 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 CST7O76096 145 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 CDS2O95674 445 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 PSG2P11465 335 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 NKX2-1P43699 371 aaPredicted RBP12.25□□□□□ -0.45
DDX41-208ENST00000507955 B2MP61769 119 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TPRX1Q8N7U7 411 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 ABHD14AQ9BUJ0 271 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TRAPPC2LQ9UL33 140 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 H3BP45 60 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 K7EM74 188 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 TM4SF5O14894 197 aa12.25□□□□□ -0.45
DDX41-208ENST00000507955 IGLV2-14P01704 120 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms