RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ANKRD20A5PA0PJZ0 165 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 F2RL2O00254 374 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 SPINT2O43291 252 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 HLA-DMAP28067 261 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 KIR2DS4P43632 304 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 DVL1P1P54792 670 aaPredicted RBP11.64□□□□□ -0.55
RNF4-208ENST00000507247 DLX1P56177 255 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 ARF6P62330 175 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 KIR2DS1Q14954 304 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 LTC4SQ16873 150 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 UTF1Q5T230 341 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 Q8N7P7 452 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 OR4A4PQ8NGN8 299 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 COX4I2Q96KJ9 171 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 DMRTB1Q96MA1 342 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 CABLES2Q9BTV7 478 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 SIRPDQ9H106 197 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 GAL3ST2Q9H3Q3 398 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 IDI2-AS1Q9NZ38 188 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 VPS13CQ709C8 3753 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 CCDC168Q8NDH2 2452 aa11.64□□□□□ -0.55
RNF4-208ENST00000507247 HIVEP1P15822 2718 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.552e-7■■■■■ 29.5
RNF4-208ENST00000507247 IGHV3-43A0A0B4J1X8 118 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 TRAV20A0A0B4J274 112 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 A0A1W2PPH5 198 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 M0QYG6 137 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 M0R1W7 72 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 PMP2P02689 132 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 CD3DP04234 171 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 IGHV3-43DP0DP04 118 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
RNF4-208ENST00000507247 HRH1P35367 487 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 GZMKP49863 264 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 LOXL3P58215 753 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 IFITM3Q01628 133 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 PRB3Q04118 309 aaPredicted RBP11.63□□□□□ -0.55
RNF4-208ENST00000507247 KLF9Q13886 244 aaPredicted RBP11.63□□□□□ -0.55
RNF4-208ENST00000507247 GNMTQ14749 295 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 TRIQKQ629K1 86 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 KIR3DL3Q8N743 410 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 TMEM229BQ8NBD8 167 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 OR5AP2Q8NGF4 316 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 OR52L2PQ8NGH6 319 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 IL1F10Q8WWZ1 152 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 ABCB10Q9NRK6 738 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 ZNF107Q9UII5 783 aaPredicted RBP11.63□□□□□ -0.55
RNF4-208ENST00000507247 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
RNF4-208ENST00000507247 FAM172BPA6NC97 362 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 ZNF736B4DX44 427 aaPredicted RBP11.62□□□□□ -0.55
RNF4-208ENST00000507247 SDCBPO00560 298 aaPredicted RBP11.62□□□□□ -0.55
RNF4-208ENST00000507247 UPK1BO75841 260 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 TGFAP01135 160 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 CD74P04233 296 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 CSF1P09603 554 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 IGHV1-8P0DP01 117 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 MMP9P14780 707 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 FPR2P25090 351 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 RFX2P48378 723 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 TAS2R19P59542 299 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 ARPC4P59998 168 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 PAX8Q06710 450 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 KRTAP1-1Q07627 177 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 CDK10Q15131 360 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 CHRFAM7AQ494W8 412 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 FAAP20Q6NZ36 180 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 BTNL3Q6UXE8 466 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 ZNF782Q6ZMW2 699 aaPredicted RBP11.62□□□□□ -0.55
RNF4-208ENST00000507247 TOMM5Q8N4H5 51 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 OR4D10Q8NGI6 311 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 OR5H2Q8NGV7 314 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 GALMQ96C23 342 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 TINAGL1Q9GZM7 467 aaPredicted RBP11.62□□□□□ -0.55
RNF4-208ENST00000507247 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 SLC23A1Q9UHI7 598 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 KPTNQ9Y664 436 aa11.62□□□□□ -0.55
RNF4-208ENST00000507247 TRBV6-7A0A0A0MS04 114 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 BET1O15155 118 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 RBP4P02753 201 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 TAS2R46P59540 309 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 HTD2P86397 168 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 DCAF12L2Q5VW00 463 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 ZNF57Q68EA5 555 aaPredicted RBP11.61□□□□□ -0.55
RNF4-208ENST00000507247 CYB5R2Q6BCY4 276 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 STEAP1BQ6NZ63 245 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 SPNS3Q6ZMD2 512 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 OVCH2Q7RTZ1 564 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 VMO1Q7Z5L0 202 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 GLCCI1Q86VQ1 547 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 OR10A7Q8NGE5 316 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 OR4C16Q8NGL9 310 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 TBX15Q96SF7 602 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 PARP12Q9H0J9 701 aaKnown RBP11.61□□□□□ -0.55
RNF4-208ENST00000507247 RAB9BQ9NP90 201 aa11.61□□□□□ -0.55
RNF4-208ENST00000507247 OR2S2Q9NQN1 319 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms