RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 ALOX5APP20292 161 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 CST5P28325 142 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 PRDX3P30048 256 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 FCGR2CP31995 323 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 GUCA2AQ02747 115 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 RUNX3Q13761 415 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 ZNF385BQ569K4 471 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 MDGA2Q7Z553 956 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 CENPVQ7Z7K6 275 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 KRTCAP2Q8N6L1 136 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM229BQ8NBD8 167 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 OR4K13Q8NH42 304 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 OR4A16Q8NH70 328 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 STAG3L4Q8TBR4 150 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 OR51E1Q8TCB6 317 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 SLC38A5Q8WUX1 472 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 COA7Q96BR5 231 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 MSI2Q96DH6 328 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 DERL3Q96Q80 235 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 HES4Q9HCC6 221 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 PCTPQ9UKL6 214 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 HELZP42694 1942 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 J3KTA2 159 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 SERF1AO75920 110 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 HBE1P02100 147 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 DBIP07108 87 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 CSRP1P21291 193 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 AQP1P29972 269 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 APOBEC1P41238 236 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 TNFSF9P41273 254 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 ZNF121P58317 390 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 KLRD1Q13241 179 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 NR0B2Q15466 257 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 PRRT2Q7Z6L0 340 aaPredicted RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 TEX29Q8N6K0 151 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 EMG1Q92979 244 aaKnown RBP5.33□□□□□ -1.56
PDE4D-216ENST00000507116 WDYHV1Q96HA8 205 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 MS4A4AQ96JQ5 239 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 ATP5SQ99766 215 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 SLC25A33Q9BSK2 321 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 NDC1Q9BTX1 674 aa5.33□□□□□ -1.56
PDE4D-216ENST00000507116 UBR2Q8IWV8 1755 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 TRAV36DV7A0A075B6V5 113 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ZNF217O75362 1048 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CLEC3AO75596 197 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 IGHG3P01860 377 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 IFNW1P05000 195 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CD55P08174 381 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CR2P20023 1033 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 RPL15P61313 204 aaKnown RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ZIC1Q15915 447 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ACSF3Q4G176 576 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ADAMTSL5Q6ZMM2 481 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 OR52E2Q8NGJ4 325 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 OR51A4Q8NGJ6 313 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 OR8S1Q8NH09 359 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 VN1R3Q9BXE9 311 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 GPR84Q9NQS5 396 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 SPANXB1Q9NS25 103 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ATG2AQ2TAZ0 1938 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ARFGEF1Q9Y6D6 1849 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 A0A0G2JLL6 359 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CD300LBA8K4G0 201 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 FCN3O75636 299 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 OR7C1O76099 320 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 HLA-DRB1P01911 266 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 GPX1P07203 203 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CT45A6P0DMU7 189 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CT45A5P0DMU8 189 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CT45A7P0DMV0 189 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 EDN2P20800 178 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 EVI2AP22794 236 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 PRSS3P35030 304 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 SMIM11AP58511 58 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 TGFBR3Q03167 851 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 TUSC3Q13454 348 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ELOCQ15369 112 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM97Q5BJF2 176 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CT45A1Q5HYN5 189 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 FAM90A2PQ658T7 463 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 FAM219AQ8IW50 185 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 OR4N5Q8IXE1 308 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CT45A3Q8NHU0 189 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 PLPPR1Q8TBJ4 325 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 FLYWCH2Q96CP2 140 aaKnown RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 MMABQ96EY8 250 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 SPAG8Q99932 426 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 WDR76Q9H967 626 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ABT1Q9ULW3 272 aaKnown RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 MCM3APO60318 1980 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 SCN8AQ9UQD0 1980 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 LIPT2A6NK58 231 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 VWC2LB2RUY7 222 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 ISLRO14498 428 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 SH2D1BO14796 132 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 CRISP2P16562 243 aa5.32□□□□□ -1.56
PDE4D-216ENST00000507116 PAFAH1B3Q15102 231 aaKnown RBP5.32□□□□□ -1.56
PDE4D-216ENST00000507116 PDCD1Q15116 288 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms