RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DUX4L4P0CJ87 422 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4L5P0CJ88 424 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4L6P0CJ89 424 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4L7P0CJ90 424 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 TBPP20226 339 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 CEBPDP49716 269 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 TAGLNQ01995 201 aaKnown RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 MXD1Q05195 221 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF273Q14593 569 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 ATXN7L3Q14CW9 347 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF260Q3ZCT1 412 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4L9Q6RFH8 374 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 C1orf229Q6ZS94 237 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 TCF23Q7RTU1 214 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 C16orf82Q7Z2V1 217 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 OR8H3Q8N146 312 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 MRPL30Q8TCC3 161 aaKnown RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 SSMEM1Q8WWF3 244 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 ARHGAP5-AS1Q96IT6 56 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 KIRREL1Q96J84 757 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 SULT4A1Q9BR01 284 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 NXF2Q9GZY0 626 aaKnown RBP6.92□□□□□ -1.3
PDGFC-205ENST00000506880 Q9N2K0 584 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 GFOD1Q9NXC2 390 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4Q9UBX2 424 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 PITPNC1Q9UKF7 332 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 GAB2Q9UQC2 676 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 CEPT1Q9Y6K0 416 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 A0A0A6YYD4 124 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 IGHV2-26A0A0B4J1V2 119 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 TRAV40A0A0B4J280 105 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 BTBD17A6NE02 478 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 LEUTXA8MZ59 168 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 TRDCB7Z8K6 153 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 TOR1AO14656 332 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 CTDSPLO15194 276 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 SOCS1O15524 211 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 TCF21O43680 179 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 ZBTB25P24278 435 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 CDK2P24941 298 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 HTR1DP28221 377 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 CLDN12P56749 244 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 GNG2P59768 71 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 HILS1P60008 231 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 ACTBP60709 375 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 ACTG1P63261 375 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 HLA-DRB3P79483 266 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 ARFRP1Q13795 201 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 C17orf58Q2M2W7 97 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 KLF17Q5JT82 389 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-205ENST00000506880 PLAC9Q5JTB6 97 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 TMEM69Q5SWH9 247 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 C6orf201Q7Z4U5 140 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 THNSL2Q86YJ6 484 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 SAMD12Q8N8I0 201 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 OR4M1Q8NGD0 313 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 PLPPR1Q8TBJ4 325 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 ARL11Q969Q4 196 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 SLC25A38Q96DW6 304 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 NICN1Q9BSH3 213 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 FAAP24Q9BTP7 215 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 CABLES2Q9BTV7 478 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 MMP28Q9H239 520 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 GSX1Q9H4S2 264 aaPredicted RBP6.91□□□□□ -1.3
PDGFC-205ENST00000506880 TAF9BQ9HBM6 251 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF286AQ9HBT8 521 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 PIPOXQ9P0Z9 390 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 DPM3Q9P2X0 92 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 FAM96BQ9Y3D0 163 aa6.91□□□□□ -1.3
PDGFC-205ENST00000506880 A0A1B0GUS0 222 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 RNASEK-C17orf49H0YIS7 233 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 TRIM77I1YAP6 450 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 PAHP00439 452 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 AVPP01185 164 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 HBZP02008 142 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 FCGR3AP08637 254 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 SLC2A2P11168 524 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 SNRPBP14678 240 aaKnown RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 NAT1P18440 290 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 BRS3P32247 399 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 S100A5P33763 92 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 SNU13P55769 128 aaKnown RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 LOXL3P58215 753 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 TAS2R46P59540 309 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 LSM3P62310 102 aaKnown RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 HOXA4Q00056 320 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF816Q0VGE8 651 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 MADCAM1Q13477 382 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 HLA-DRB5Q30154 266 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 CDNFQ49AH0 187 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 ACTBL2Q562R1 376 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 OR10K2Q6IF99 312 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 CNIH2Q6PI25 160 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 C11orf88Q6PI97 169 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 Q6YL49 198 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms