RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LINC00596Q86U02 117 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 DTX3Q8N9I9 347 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF565Q8N9K5 539 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 OR10A7Q8NGE5 316 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 RFESDQ8TAC1 157 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 CITED2Q99967 270 aaPredicted RBP11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 SLC25A33Q9BSK2 321 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 BARHL1Q9BZE3 327 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 ING4Q9UNL4 249 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 A0A1W2PPK0 400 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 SC5DO75845 299 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 OR7C1O76099 320 aaPredicted RBP11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 IGHV3-7P01780 117 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 CD37P11049 281 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 GALP22466 123 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 NFYBP25208 207 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 INSL4Q14641 139 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 SPCS2Q15005 226 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 TRAM1Q15629 374 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 SSX1Q16384 188 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 LIPKQ5VXJ0 399 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 C10orf99Q6UWK7 81 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 UNQ9370/PRO34162Q6UXP9 181 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF497Q6ZNH5 498 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 CDH26Q8IXH8 852 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 CREB3L1Q96BA8 519 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 CHCHD6Q9BRQ6 235 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 SSR3Q9UNL2 185 aa11.13□□□□□ -0.63
PDLIM7-211ENST00000504318 LOC100506127A0A0U1RQW1 187 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 PNMA8CA0A1B0GUJ8 204 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF780AO75290 641 aaPredicted RBP11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 MT-ND4P03905 459 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 CELP19835 753 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 BRS3P32247 399 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 PRRX1P54821 245 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 VBP1P61758 197 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 NCS1P62166 190 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 SLC22A6Q4U2R8 563 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF439Q8NDP4 499 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
PDLIM7-211ENST00000504318 TOR1AO14656 332 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 GTF2F2P13984 249 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 CEACAM3P40198 252 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 LSM3P62310 102 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF816Q0VGE8 651 aaPredicted RBP11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 EBI3Q14213 229 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 ABCA11PQ4W5N1 156 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 GLIPR1L1Q6UWM5 242 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 DRAM1Q8N682 238 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 DYNC2LI1Q8TCX1 351 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 Q96M66 194 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 OR51E2Q9H255 320 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 MRPS28Q9Y2Q9 187 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 A3GALT2U3KPV4 340 aa11.11□□□□□ -0.63
PDLIM7-211ENST00000504318 A0A1W2PPE3 182 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 TMEM30CPA0ZSE6 113 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 ORC5O43913 435 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 CSTBP04080 98 aaKnown RBP11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 MAS1P04201 325 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 LPLP06858 475 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 GZMHP20718 246 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 SOX6P35712 828 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 GNG10P50151 68 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 RBM39Q14498 530 aaKnown RBP11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 LTC4SQ16873 150 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 NSUN5P1Q3KNT7 163 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 FAM27D1Q5T7N8 215 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 CCDC144NLQ6NUI1 221 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 LRRTM1Q86UE6 522 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 Q8N6K4 173 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 OR5AU1Q8NGC0 362 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 OR56B4Q8NH76 319 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 UBALD1Q8TB05 177 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 TOMM40LQ969M1 308 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 RPEQ96AT9 228 aa11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 MRPS24Q96EL2 167 aaKnown RBP11.1□□□□□ -0.63
PDLIM7-211ENST00000504318 TRDV1A0A1B0GX56 115 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 FAM90A10PA6NDY2 464 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 FAM90A7PA6NKC0 464 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 FAM90A23PA8MXZ1 464 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 C12orf77C9JDV5 145 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 SLC31A2O15432 143 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 FGF9P31371 208 aaPredicted RBP11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 RAB7AP51149 207 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF134P52741 427 aa11.09□□□□□ -0.63
PDLIM7-211ENST00000504318 ZNF137PP52743 207 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms