RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ZNF83P51522 516 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 MSMPQ1L6U9 139 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 ACP7Q6ZNF0 438 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 ASCL5Q7RTU5 278 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 S100PBPQ96BU1 408 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 CLEC18AA5D8T8 446 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 B8ZZF3 427 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 VDAC1P21796 283 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 NKX2-1P43699 371 aaPredicted RBP18.95■□□□□ 0.62
PCDH1-204ENST00000503492 GNMTQ14749 295 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 ALKBH2Q6NS38 261 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 UBAC2Q8NBM4 344 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 CLEC18CQ8NCF0 446 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 OR51H1Q8NH63 302 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 SMIM8Q96KF7 97 aa18.95■□□□□ 0.62
PCDH1-204ENST00000503492 PARP12Q9H0J9 701 aaKnown RBP18.95■□□□□ 0.62
PCDH1-204ENST00000503492 HSPA12AO43301 675 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 TFF1P04155 84 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 S100GP29377 79 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 POLR2GP62487 172 aaKnown RBP eCLIP18.94■□□□□ 0.62
PCDH1-204ENST00000503492 NHLH2Q02577 135 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 CXorf66Q5JRM2 361 aaPredicted RBP18.94■□□□□ 0.62
PCDH1-204ENST00000503492 UQCC3Q6UW78 93 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.94■□□□□ 0.62
PCDH1-204ENST00000503492 IL22RA2Q969J5 263 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 ARL11Q969Q4 196 aa18.94■□□□□ 0.62
PCDH1-204ENST00000503492 A0A1B0GWJ7 208 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 HEXAP06865 529 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 SAT2Q96F10 170 aaPredicted RBP18.93■□□□□ 0.62
PCDH1-204ENST00000503492 ARV1Q9H2C2 271 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 PROB1E7EW31 1015 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 APOC3P02656 99 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 TIMP3P35625 211 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 SULT1A2P50226 295 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 EIF2S3LQ2VIR3 472 aaKnown RBP18.93■□□□□ 0.62
PCDH1-204ENST00000503492 TIMM23BQ5SRD1 257 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 C1orf174Q8IYL3 243 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 GLS2Q9UI32 602 aa18.93■□□□□ 0.62
PCDH1-204ENST00000503492 PTBP3O95758 552 aaKnown RBP18.92■□□□□ 0.62
PCDH1-204ENST00000503492 PSG2P11465 335 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 LPAR6P43657 344 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 PXDC1Q5TGL8 231 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 LRP11Q86VZ4 500 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 MMP26Q9NRE1 261 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 KIAA2026Q5HYC2 2103 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 TMEM30CPA0ZSE6 113 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 M0R1B8 84 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 AKR1C2P52895 323 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 AKR1C1Q04828 323 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 NARS2Q96I59 477 aaKnown RBP18.92■□□□□ 0.62
PCDH1-204ENST00000503492 MAGT1Q9H0U3 335 aa18.92■□□□□ 0.62
PCDH1-204ENST00000503492 A0A0G2JRQ6 117 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 MED6O75586 246 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 WNT2P09544 360 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 CEACAM6P40199 344 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 AESQ08117 197 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 PRR7Q8TB68 274 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 PPP1R3CQ9UQK1 317 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 FAM24AA6NFZ4 105 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 OR8U9P0C7N5 309 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 SRSF3P84103 164 aaKnown RBP18.91■□□□□ 0.62
PCDH1-204ENST00000503492 EWSR1Q01844 656 aaKnown RBP eCLIP18.91■□□□□ 0.62
PCDH1-204ENST00000503492 ID3Q02535 119 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 SLC35E4Q6ICL7 350 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 OR2C3Q8N628 320 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 OR8U1Q8NH10 309 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 HRH4Q9H3N8 390 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 METRNQ9UJH8 293 aa18.91■□□□□ 0.62
PCDH1-204ENST00000503492 RBM7Q9Y580 266 aaKnown RBP18.91■□□□□ 0.62
PCDH1-204ENST00000503492 DSPP15924 2871 aaKnown RBP18.91■□□□□ 0.62
PCDH1-204ENST00000503492 LAMA5O15230 3695 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 KRTCAP3Q53RY4 240 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 OR2Z1Q8NG97 314 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 OR1L1Q8NH94 360 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 FAM57AQ8TBR7 257 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 COQ2Q96H96 371 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 ABHD14BQ96IU4 210 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 AKR1E2Q96JD6 320 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 DUSP13Q9UII6 198 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 BOD1L1Q8NFC6 3051 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 MKRN2OSH3BPM6 223 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 SSSCA1O60232 199 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 CEACAM8P31997 349 aaPredicted RBP18.9■□□□□ 0.62
PCDH1-204ENST00000503492 OR3A1P47881 315 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 BTN1A1Q13410 526 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 ATRAIDQ6UW56 229 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 KCNIP1Q9NZI2 227 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 KCNS2Q9ULS6 477 aa18.9■□□□□ 0.62
PCDH1-204ENST00000503492 BORCS7-ASMTA0A0B4J1R7 106 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 IGSF23A1L1A6 192 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 NUDT19A8MXV4 375 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 C12orf77C9JDV5 145 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 SERPINE2P07093 398 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 PJVKQ0ZLH3 352 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 CHD3Q12873 2000 aaKnown RBP18.89■□□□□ 0.61
PCDH1-204ENST00000503492 MGAQ8IWI9 3026 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 ABCD4O14678 606 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 NXPH3O95157 252 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 IGKV1-39P01597 117 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 IGKV1D-39P04432 117 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms