RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 CMTM1Q8IZ96 169 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 BOLLQ8N9W6 283 aaKnown RBP7.55□□□□□ -1.2
NR1I3-216ENST00000502848 EDARADDQ8WWZ3 215 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 NINJ1Q92982 152 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 RAB39BQ96DA2 213 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 PHB2Q99623 299 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-216ENST00000502848 SUCNR1Q9BXA5 334 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 C5orf66Q9H5L9 145 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 FAM212BQ9NTI7 297 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-216ENST00000502848 ZNF69Q9UC07 566 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 MIOXQ9UGB7 285 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 KCNIP3Q9Y2W7 256 aa7.55□□□□□ -1.2
NR1I3-216ENST00000502848 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-216ENST00000502848 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
NR1I3-216ENST00000502848 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 C15orf65H3BRN8 121 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 GPR31O00270 319 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 BET1O15155 118 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 TMPRSS2O15393 492 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 NDUFB3O43676 98 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 SSNA1O43805 119 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 SFT2D2O95562 160 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 HLA-AP01891 365 aaKnown RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 HBZP02008 142 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 GYPAP02724 150 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 GIPP09681 153 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 COX6B1P14854 86 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 PAX1P15863 534 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 AADACP22760 399 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 IL2RGP31785 369 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 GLIPR1P48060 266 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 LUMP51884 338 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 CBX3Q13185 183 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 ABCA11PQ4W5N1 156 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 TMED4Q7Z7H5 227 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 SGPP2Q8IWX5 399 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 ZCCHC24Q8N2G6 241 aaKnown RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 C12orf45Q8N5I9 185 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 LRTM2Q8N967 370 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 C8orf31Q8N9H6 132 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 BVESQ8NE79 360 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 OR5T2Q8NGG2 359 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 TMEM246Q9BRR3 403 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 GAL3ST2Q9H3Q3 398 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 PLEKHF2Q9H8W4 249 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
NR1I3-216ENST00000502848 SLC25A10Q9UBX3 287 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-216ENST00000502848 UBR5O95071 2799 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-216ENST00000502848 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 KBTBD11-OT1A0A1B0GTJ5 212 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 DUXBA0A1W2PPF3 345 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 A0A1W2PPH5 198 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 RNF212BA8MTL3 300 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 HSPA12AO43301 675 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 ADAM20O43506 726 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 YPEL1O60688 119 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 OR2A4O95047 310 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 IFNA2P01563 188 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 DAOP14920 347 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 RPS2P15880 293 aaKnown RBP7.53□□□□□ -1.2
NR1I3-216ENST00000502848 RAB7AP51149 207 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 RAP2BP61225 183 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 SRSF4Q08170 494 aaKnown RBP7.53□□□□□ -1.2
NR1I3-216ENST00000502848 PPP1R1AQ13522 171 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 FAM201AQ5SY85 155 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 LIN54Q6MZP7 749 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-216ENST00000502848 OR2AK2Q8NG84 335 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 OR10V1Q8NGI7 309 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 OR13A1Q8NGR1 328 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 C8orf46Q8TAG6 207 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 RTN4IP1Q8WWV3 396 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-216ENST00000502848 IL22RA2Q969J5 263 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 TMEM230Q96A57 120 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 CYYR1Q96J86 154 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 ST6GAL2Q96JF0 529 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 YPEL2Q96QA6 119 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 OR2A7Q96R45 310 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 CCL13Q99616 98 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 SEC22CQ9BRL7 303 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 LIME1Q9H400 295 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 UBTD1Q9HAC8 227 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 RAB18Q9NP72 206 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 CALYQ9NYX4 217 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 CLN8Q9UBY8 286 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 GAB2Q9UQC2 676 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
NR1I3-216ENST00000502848 ZNF462Q96JM2 2506 aa7.52□□□□□ -1.21
NR1I3-216ENST00000502848 F5H0A9 414 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-216ENST00000502848 J3QKU1 62 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms