RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 LRRC30A6NM36 301 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 B9A039 149 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 NPIPB11E5RHQ5 1161 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 HSD17B6O14756 317 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 OR5AC1P0C628 307 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 SP6Q3SY56 376 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 ZNF818PQ6ZRF7 136 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 LDLRAD3Q86YD5 345 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 MUC15Q8N387 334 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 ZBTB8BQ8NAP8 495 aaPredicted RBP14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 SNX22Q96L94 193 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 CNTNAP3BQ96NU0 1288 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 DCTN5Q9BTE1 182 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 CNTNAP3Q9BZ76 1288 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 MS4A5Q9H3V2 200 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 OR2W1Q9Y3N9 320 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 LRBAP50851 2863 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 HRNRQ86YZ3 2850 aaPredicted RBP14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 C13orf42A0A1B0GVH6 325 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 C5orf51A6NDU8 294 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 GYPAP02724 150 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 HLA-GP17693 338 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 SSTR5P35346 364 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 ZNF808Q8N4W9 903 aaPredicted RBP14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 CCDC71LQ8N9Z2 235 aa14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 PARP12Q9H0J9 701 aaKnown RBP14.86□□□□□ -0.03
CHRNA4-206ENST00000498043 A0A0B4J2A0 478 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 MGST3O14880 152 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 LRRC37A5PQ49AS3 106 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 PPP1R35Q8TAP8 253 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 ASB13Q8WXK3 278 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 CCL17Q92583 94 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 GPHA2Q96T91 129 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 TMEM246Q9BRR3 403 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 TMEM204Q9BSN7 226 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 SEBOXQ9HB31 216 aaPredicted RBP14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 CCL28Q9NRJ3 127 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 RDH8Q9NYR8 311 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 SHPKQ9UHJ6 478 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 TANC2Q9HCD6 1990 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 ARFGEF3Q5TH69 2177 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 MPTX1A8MV57 137 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 K7N7A8 449 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 HBZP02008 142 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 IL2RGP31785 369 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 EDDM3BP56851 147 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 IFITM2Q01629 132 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 C6orf183Q5T699 404 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 ZNF561Q8N587 486 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 GAFA1Q96PS6 74 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 CCL13Q99616 98 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 RAB18Q9NP72 206 aa14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 FBXO9Q9UK97 447 aaPredicted RBP14.85□□□□□ -0.03
CHRNA4-206ENST00000498043 FXYD6-FXYD2A0A087WZ82 144 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 ODAMA1E959 279 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 GPR31O00270 319 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 RGS11O94810 467 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 HOXB5P09067 269 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 MUC1P15941 1255 aaPredicted RBP14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 PAX5Q02548 391 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 TEX36Q5VZQ5 186 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 FAM53AQ6NSI3 398 aaPredicted RBP14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 GSG1LQ6UXU4 331 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 FAM216BQ8N7L0 139 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 GALMQ96C23 342 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 METTL8Q9H825 291 aaKnown RBP14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 KCNIP3Q9Y2W7 256 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 CACNA1BQ00975 2339 aa14.84□□□□□ -0.03
CHRNA4-206ENST00000498043 PHF1O43189 567 aaPredicted RBP14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 TNFSF12O43508 249 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 CEACAM6P40199 344 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 GNMTQ14749 295 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 SWI5Q1ZZU3 235 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 TBC1D26Q86UD7 250 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 OR10V1Q8NGI7 309 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 GALNT14Q96FL9 552 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 SDSLQ96GA7 329 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 TP53RKQ96S44 253 aa14.83□□□□□ -0.03
CHRNA4-206ENST00000498043 TRAV14DV4A0A0A6YYC5 116 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 TMEM178BH3BS89 294 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 MPPED1O15442 326 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 CD8AP01732 235 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 PRB1P04280 392 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 P2RX3P56373 397 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 SRSF4Q08170 494 aaKnown RBP14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 TMEM187Q14656 261 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 FAM185AQ8N0U4 392 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 C1orf87Q8N0U7 546 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 OR52L2PQ8NGH6 319 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 ARL11Q969Q4 196 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 VRK1Q99986 396 aaPredicted RBP14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 TMEM106BQ9NUM4 274 aa14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 RBM7Q9Y580 266 aaKnown RBP14.83□□□□□ -0.04
CHRNA4-206ENST00000498043 HEXAP06865 529 aa14.82□□□□□ -0.04
CHRNA4-206ENST00000498043 AGAP20933 346 aa14.82□□□□□ -0.04
CHRNA4-206ENST00000498043 SSTR2P30874 369 aa14.82□□□□□ -0.04
CHRNA4-206ENST00000498043 LUMP51884 338 aaPredicted RBP14.82□□□□□ -0.04
CHRNA4-206ENST00000498043 LGALSLQ3ZCW2 172 aaPredicted RBP14.82□□□□□ -0.04
CHRNA4-206ENST00000498043 RFESDQ8TAC1 157 aa14.82□□□□□ -0.04
CHRNA4-206ENST00000498043 PPP1R1CQ8WVI7 109 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms